7CBM

Cryo-EM structure of the flagellar distal rod with partial hook from Salmonella


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DASCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
EA [auth DB]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
FA [auth DC]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
GA [auth DD]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
HA [auth DE]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
IA [auth DF]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
JA [auth DG]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
KA [auth DH]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
MA [auth DJ]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
NA [auth DK]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)
LA [auth DI]SCOP2B SuperfamilyFlagellar hook protein flgE 8043628 3000296 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AflgGe7cbmA1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
AFlg_bb_rode7cbmA2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
AA [auth V]flgGe7cbmV1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
AA [auth V]Flg_bb_rode7cbmV2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
BflgGe7cbmB1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
BFlg_bb_rode7cbmB2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
BA [auth W]flgGe7cbmW1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
BA [auth W]Flg_bb_rode7cbmW2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
CflgGe7cbmC1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
CFlg_bb_rode7cbmC2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
CA [auth X]flgGe7cbmX1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
CA [auth X]Flg_bb_rode7cbmX2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
DflgGe7cbmD1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
DFlg_bb_rode7cbmD2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
EflgGe7cbmE1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
EFlg_bb_rode7cbmE2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
FflgGe7cbmF1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
FFlg_bb_rode7cbmF2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
GflgGe7cbmG1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
GFlg_bb_rode7cbmG2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
HflgGe7cbmH1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
HFlg_bb_rode7cbmH2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
IflgGe7cbmI1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
IFlg_bb_rode7cbmI2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
KflgGe7cbmK1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
KFlg_bb_rode7cbmK2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
LflgGe7cbmL1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
LFlg_bb_rode7cbmL2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
MflgGe7cbmM1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
MFlg_bb_rode7cbmM2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
NflgGe7cbmN1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
NFlg_bb_rode7cbmN2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
OflgGe7cbmO1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
OFlg_bb_rode7cbmO2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
PflgGe7cbmP1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
PFlg_bb_rode7cbmP2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
QflgGe7cbmQ1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
QFlg_bb_rode7cbmQ2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
RflgGe7cbmR1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
RFlg_bb_rode7cbmR2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
SflgGe7cbmS1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
SFlg_bb_rode7cbmS2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
TflgGe7cbmT1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
TFlg_bb_rode7cbmT2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
UflgGe7cbmU1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
UFlg_bb_rode7cbmU2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)
JflgGe7cbmJ1 A: beta complex topologyX: Flagellar hook protein flgE D1 domain (From Topology)H: Flagellar hook protein flgE D1 domain (From Topology)T: Flagellar hook protein flgE D1 domainF: flgGECOD (1.6)
JFlg_bb_rode7cbmJ2 A: a+b two layersX: Flagellar hook protein FlgE D0 domain (From Topology)H: Flagellar hook protein FlgE D0 domain (From Topology)T: Flagellar hook protein FlgE D0 domainF: Flg_bb_rodECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF22692Flagellar hook protein FlgE/F/G D1 domain (LlgE_F_G_D1)Flagellar hook protein FlgE/F/G D1 domainThis entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular ...This entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular structure that connects the flagellar motor to the long filament acting as a helical propeller.
Domain
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus.Domain
PF22692Flagellar hook protein FlgE/F/G D1 domain (LlgE_F_G_D1)Flagellar hook protein FlgE/F/G D1 domainThis entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular ...This entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular structure that connects the flagellar motor to the long filament acting as a helical propeller.
Domain
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus.Domain
PF07559Flagellar basal body protein FlaE D2 domain (FlgE_D2)Flagellar basal body protein FlaE D2 domainThis entry consists of several bacterial FlaE flagellar proteins. These proteins are part of the flagellar basal body rod complex. FlgE comprises two domains, D1 and D2, this entry represents D2, a flattened, eight-strand beta-barrel with significan ...This entry consists of several bacterial FlaE flagellar proteins. These proteins are part of the flagellar basal body rod complex. FlgE comprises two domains, D1 and D2, this entry represents D2, a flattened, eight-strand beta-barrel with significant irregularity and extra loops [1,2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Flagellar basal-body rod protein FlgG-
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
Flagellar basal-body rod protein FlgF-
Flagellar hook protein FlgE-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR012834Flagellar basal-body rod FlgGFamily
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
IPR001444Flagellar basal body rod protein, N-terminalDomain
V [auth a],
W [auth b],
X [auth c],
Y [auth d],
Z [auth e]
IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily
IPR011491Flagellar hook protein FlgE, D2 domainDomain
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR037058Flagellar hook protein FlgE superfamilyHomologous Superfamily
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily