7BWK

Structure of DotL(656-783)-IcmS-IcmW-LvgA-VpdB(461-590) derived from Legionella pneumophila

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	UNK_F_TYPE	e7bwkB1	A: alpha arrays	X: IcmS (From Topology)	H: IcmS (From Topology)	T: IcmS	F: UNK_F_TYPE	ECOD (1.6)
G	UNK_F_TYPE	e7bwkG1	A: alpha arrays	X: IcmS (From Topology)	H: IcmS (From Topology)	T: IcmS	F: UNK_F_TYPE	ECOD (1.6)
C	UNK_F_TYPE	e7bwkC1	A: alpha arrays	X: IcmW (From Topology)	H: IcmW (From Topology)	T: IcmW	F: UNK_F_TYPE	ECOD (1.6)
H	UNK_F_TYPE	e7bwkH1	A: alpha arrays	X: IcmW (From Topology)	H: IcmW (From Topology)	T: IcmW	F: UNK_F_TYPE	ECOD (1.6)
D	UNK_F_TYPE	e7bwkD1	A: a+b two layers	X: Hypothetical virulence protein (From Topology)	H: Hypothetical virulence protein (From Topology)	T: Hypothetical virulence protein	F: UNK_F_TYPE	ECOD (1.6)
I	UNK_F_TYPE	e7bwkI1	A: a+b two layers	X: Hypothetical virulence protein (From Topology)	H: Hypothetical virulence protein (From Topology)	T: Hypothetical virulence protein	F: UNK_F_TYPE	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B, G	PF12608	Type IVb secretion, IcmS, effector-recruitment (T4bSS_IcmS)	Type IVb secretion, IcmS, effector-recruitment	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, F	IcmO (DotL)	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport establishment of localization localization protein transport cellular macromolecule localization macromolecule localization cellular process	cell periphery plasma membrane membrane cellular anatomical entity
B, G	IcmS	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport establishment of localization localization protein transport cellular macromolecule localization macromolecule localization cellular process	intracellular anatomical structure cytoplasm cellular anatomical entity
C, H	IcmW	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport establishment of localization localization protein transport cellular macromolecule localization macromolecule localization cellular process	intracellular anatomical structure cytoplasm cellular anatomical entity
D, I	Hypothetical virulence protein	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport establishment of localization localization protein transport cellular macromolecule localization macromolecule localization cellular process	intracellular anatomical structure cytoplasm cellular anatomical entity
E, J	PNPLA domain-containing protein	hydrolase activity catalytic activity	lipid catabolic process catabolic process metabolic process primary metabolic process lipid metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, F	IPR051162	Type IV secretion system component	Family
A, F	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, F	IPR032689	TraD/TraG, TraM recognition site	Domain
B, G	IPR022250	Type IVb secretion, IcmS, effector-recruitment	Family
C, H	IPR049919	Type 4 adapter protein IcmW	Family
E, J	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	Homologous Superfamily
E, J	IPR002641	Patatin-like phospholipase domain	Domain
E, J	IPR052580	Probable Lipid Hydrolase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.