7BBP
Crystal Structure of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in complex with H4K5acK8ac
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth BBB] | SCOP2B Superfamily | Bromodomain | 8084279 | 3001843 | SCOP2B (2022-06-29) |
A [auth AAA] | SCOP2B Superfamily | Bromodomain | 8084279 | 3001843 | SCOP2B (2022-06-29) |
C [auth CCC] | SCOP2B Superfamily | Bromodomain | 8084279 | 3001843 | SCOP2B (2022-06-29) |
D [auth DDD] | SCOP2B Superfamily | Bromodomain | 8084279 | 3001843 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth BBB] | PF00439 | e7bbpBBB1 | A: alpha bundles | X: Bromodomain-like | H: Bromodomain (From Topology) | T: Bromodomain | F: PF00439 | ECOD (1.6) |
A [auth AAA] | PF00439 | e7bbpAAA1 | A: alpha bundles | X: Bromodomain-like | H: Bromodomain (From Topology) | T: Bromodomain | F: PF00439 | ECOD (1.6) |
C [auth CCC] | PF00439 | e7bbpCCC1 | A: alpha bundles | X: Bromodomain-like | H: Bromodomain (From Topology) | T: Bromodomain | F: PF00439 | ECOD (1.6) |
D [auth DDD] | PF00439 | e7bbpDDD1 | A: alpha bundles | X: Bromodomain-like | H: Bromodomain (From Topology) | T: Bromodomain | F: PF00439 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD] | PF00439 | Bromodomain (Bromodomain) | Bromodomain | Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD] | IPR019775 | WD40 repeat, conserved site | Conserved Site |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD] | IPR018359 | Bromodomain, conserved site | Conserved Site |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD] | IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD] | IPR001487 | Bromodomain | Domain |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD] | IPR036427 | Bromodomain-like superfamily | Homologous Superfamily |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD] | IPR001680 | WD40 repeat | Repeat |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD] | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
E [auth FFF], F [auth GGG] | IPR009072 | Histone-fold | Homologous Superfamily |
E [auth FFF], F [auth GGG] | IPR001951 | Histone H4 | Family |
E [auth FFF], F [auth GGG] | IPR019809 | Histone H4, conserved site | Conserved Site |
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
E [auth FFF], F [auth GGG] | ALY | Parent Component: LYS :  AA0055 :  N6-acetyl-L-lysine MOD:00064 |