Cryo-EM structure of the green-light absorbing proteorhodopsin
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| E | SCOP2B Superfamily | G protein-coupled receptor-like | 8103414 | 3000473 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | G protein-coupled receptor-like | 8103414 | 3000473 | SCOP2B (2022-06-29) |
| C | SCOP2 Family | Bacteriorhodopsin-like | 8103413 | 4001859 | SCOP2 (2022-06-29) |
| C | SCOP2 Superfamily | G protein-coupled receptor-like | 8103414 | 3000473 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | G protein-coupled receptor-like | 8103414 | 3000473 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | G protein-coupled receptor-like | 8103414 | 3000473 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| E | V-set | e7b03E1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: V-set | ECOD (v294.2) |
| D | V-set | e7b03D1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: V-set | ECOD (v294.2) |
| C | V-set | e7b03C1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: V-set | ECOD (v294.2) |
| B | V-set | e7b03B1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: V-set | ECOD (v294.2) |
| A | Acetyltransf_1 | e7b03A1 | A: beta barrels | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: Acetyltransf_1 | ECOD (v294.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Rhodopsin-like receptors and pumps | Microbial and algal rhodopsins |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Bacterial, Algal, Viral, and Unusual Rhodopsins | Proteorhodopsin (green-light absorbing) |














