7ARI
LolCDE apo structure
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth E] | MacB_PCD_1 | e7ariE2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: MacB_PCD_1 | ECOD (1.6) |
B [auth E] | lolCE | e7ariE1 | A: alpha bundles | X: Type II ABC exporter transmembrane domain fold | H: Type II ABC exporter transmembrane domain-related | T: MacB transmembrane domain | F: lolCE | ECOD (1.6) |
C [auth F] | ABC_tran | e7ariF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
D | ABC_tran | e7ariD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C] | PF12704 | MacB-like periplasmic core domain (MacB_PCD) | MacB-like periplasmic core domain | - | Family |
A [auth C] | PF02687 | FtsX-like permease family (FtsX) | FtsX-like permease family | - | Family |
B [auth E] | PF12704 | MacB-like periplasmic core domain (MacB_PCD) | MacB-like periplasmic core domain | - | Family |
B [auth E] | PF02687 | FtsX-like permease family (FtsX) | FtsX-like permease family | - | Family |
C [auth F], D | PF00005 | ABC transporter (ABC_tran) | ABC transporter | ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | ABC transporters | FtsX-like permease |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |