7AOR

mt-SSU from Trypanosoma cruzi in complex with mt-IF-3.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
VA [auth b]	F_UNCLASSIFIED	e7aorb1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S6 (From Topology)	T: Ribosomal protein S6	F: F_UNCLASSIFIED	ECOD (1.6)
M [auth aj]	F_UNCLASSIFIED	e7aoraj1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: F_UNCLASSIFIED	ECOD (1.6)
YA [auth bc]	F_UNCLASSIFIED	e7aorbc1	A: a+b two layers	X: IF3-like	H: Translation initiation factor IF3, C-terminal domain (From Topology)	T: Translation initiation factor IF3, C-terminal domain	F: F_UNCLASSIFIED	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
DB [auth A], EB [auth 2]	PF03719	Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)	Ribosomal protein S5, C-terminal domain	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
F [auth e]	uS10m	-	-	-
G [auth az]	mS72	-	-	-
T [auth ad]	mS51	-	-	-
U [auth m]	bS18m	-	-	-
V [auth i]	uS15m	-	-	-
W [auth f]	uS11m	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
BA [auth at]	mS66	-	-	-
KA [auth x]	Superoxide dismutase, putative	cation binding ion binding binding metal ion binding small molecule binding superoxide dismutase activity oxidoreductase activity, acting on superoxide radicals as acceptor oxidoreductase activity antioxidant activity catalytic activity	-	membrane cellular anatomical entity
MA [auth v]	mS37	-	-	-
OA [auth t]	Trafficking protein particle complex subunit	-	localization transport cellular process establishment of localization Golgi vesicle transport vesicle-mediated transport	protein-containing complex intracellular protein-containing complex TRAPP complex vesicle tethering complex membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum
QA [auth q]	mS26	-	-	-
TA [auth g]	bS21m	-	-	-
VA [auth b]	bS6m	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
A [auth u]	mS35	-	-	-
J [auth aw]	mS69	-	-	-
K [auth au]	Rhodanese domain-containing protein	sulfurtransferase activity transferase activity, transferring sulphur-containing groups transferase activity thiosulfate sulfurtransferase activity catalytic activity	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle
L [auth ak]	mS58	-	-	-
M [auth aj]	mS57	-	-	-
N [auth ag]	mS55	-	-	-
O [auth af]	mS54	-	-	-
P [auth ae]	mS53	-	-	-
Q [auth l]	mS52	-	-	-
R [auth ac]	mS50	-	-	-
S [auth ab]	mS49	-	-	-
B [auth s]	mS33	-	-	-
X [auth c]	uS8m	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome cytosol non-membrane-bounded organelle
Y [auth d]	uS9m	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
Z [auth ba]	mS73	-	-	-
AA [auth av]	mS68	-	-	-
CA [auth ar]	AKAP7_NLS domain-containing protein	protein kinase A binding protein binding binding protein kinase A regulatory subunit binding	cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process response to stimulus signaling biological regulation regulation of signal transduction intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of response to stimulus regulation of protein kinase A signaling regulation of cell communication cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process response to stimulus signaling biological regulation regulation of signal transduction intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of response to stimulus regulation of protein kinase A signaling regulation of cell communication protein kinase A signaling cellular process signal transduction	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol
C [auth r]	mS29	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit organellar ribosome organellar small ribosomal subunit ribosome non-membrane-bounded organelle membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit organellar ribosome organellar small ribosomal subunit ribosome non-membrane-bounded organelle mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit cellular anatomical entity intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex intracellular non-membrane-bounded organelle cytoplasm
DA [auth aq]	mS63	-	-	-
EA [auth ap]	mS62	-	-	-
FA [auth ao]	mS61	-	-	-
GA [auth ai]	mS56	-	-	-
HA [auth an]	mS60	-	-	-
IA [auth z]	mS47	hydrolase activity catalytic activity hydrolase activity, acting on ester bonds 3-hydroxyisobutyryl-CoA hydrolase activity thiolester hydrolase activity short-chain fatty acyl-CoA hydrolase activity fatty acyl-CoA hydrolase activity acyl-CoA hydrolase activity	catabolic process oxoacid metabolic process amino acid metabolic process organic acid catabolic process organic acid metabolic process alpha-amino acid metabolic process branched-chain amino acid catabolic process cellular catabolic process valine catabolic process carboxylic acid catabolic process small molecule metabolic process branched-chain amino acid metabolic process amino acid catabolic process organonitrogen compound catabolic process catabolic process oxoacid metabolic process amino acid metabolic process organic acid catabolic process organic acid metabolic process alpha-amino acid metabolic process branched-chain amino acid catabolic process cellular catabolic process valine catabolic process carboxylic acid catabolic process small molecule metabolic process branched-chain amino acid metabolic process amino acid catabolic process organonitrogen compound catabolic process organonitrogen compound metabolic process cellular metabolic process carboxylic acid metabolic process primary metabolic process alpha-amino acid catabolic process metabolic process cellular process small molecule catabolic process valine metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle intracellular organelle mitochondrion organelle intracellular membrane-bounded organelle
JA [auth y]	Sod_Fe_C domain-containing protein	cation binding ion binding binding metal ion binding small molecule binding superoxide dismutase activity oxidoreductase activity, acting on superoxide radicals as acceptor oxidoreductase activity antioxidant activity catalytic activity	-	-
LA [auth w]	Protein FYV4, mitochondrial	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle
D [auth n]	uS19	-	-	-
NA [auth bb]	mS38	-	-	-
PA [auth al]	mS59	-	-	-
RA [auth p]	mS23	-	-	-
SA [auth Ca]	mS22	-	-	-
UA [auth j]	bS16m	-	-	-
WA [auth bd]	MURF5	-	-	-
E [auth h]	uS14m	-	-	-
XA [auth a]	Ribosomal_S5_C domain-containing protein	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
YA [auth bc]	mt-iF3	-	-	-
ZA [auth aa]	mS48	-	-	membrane cellular anatomical entity
AB [auth k]	30S Ribosomal protein S17-like protein	structural molecule activity structural constituent of ribosome	organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process primary metabolic process translation gene expression macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex intracellular non-membrane-bounded organelle ribosome cytosol non-membrane-bounded organelle
BB [auth be]	Ribosome protein S12	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
CB [auth as]	mS65	-	-	-
DB [auth A], EB [auth 2]	RNA (478-MER)	-	-	-
H [auth ay]	mS71	-	-	membrane cellular anatomical entity
I [auth ax]	mS70	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F [auth e]	IPR018392	LysM domain	Domain
T [auth ad]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
U [auth m]	IPR036870	Small ribosomal subunit protein bS18 superfamily	Homologous Superfamily
V [auth i]	IPR009068	uS15/NS1, RNA-binding domain superfamily	Homologous Superfamily
W [auth f]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
BA [auth at]	IPR025487	Probable Zinc-ribbon domain	Domain
KA [auth x]	IPR036324	Manganese/iron superoxide dismutase, N-terminal domain superfamily	Homologous Superfamily
KA [auth x]	IPR019832	Manganese/iron superoxide dismutase, C-terminal	Domain
KA [auth x]	IPR036314	Manganese/iron superoxide dismutase, C-terminal domain superfamily	Homologous Superfamily
OA [auth t]	IPR016696	TRAPP I complex, subunit 5	Family
VA [auth b]	IPR035980	Small ribosomal subunit protein bS6 superfamily	Homologous Superfamily
VA [auth b]	IPR014717	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Homologous Superfamily
K [auth au]	IPR001763	Rhodanese-like domain	Domain
K [auth au]	IPR036873	Rhodanese-like domain superfamily	Homologous Superfamily
N [auth ag]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
O [auth af]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
X [auth c]	IPR000630	Small ribosomal subunit protein uS8	Family
X [auth c]	IPR035987	Small ribosomal subunit protein uS8 superfamily	Homologous Superfamily
Y [auth d]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
Y [auth d]	IPR000754	Small ribosomal subunit protein uS9	Family
Y [auth d]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
AA [auth av]	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
CA [auth ar]	IPR019510	A-kinase anchor protein 7-like, phosphoesterase domain	Domain
CA [auth ar]	IPR009097	Cyclic phosphodiesterase	Homologous Superfamily
C [auth r]	IPR019368	Small ribosomal subunit protein mS29	Family
HA [auth an]	IPR036894	Nucleoid-associated protein YbaB-like domain superfamily	Homologous Superfamily
IA [auth z]	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
IA [auth z]	IPR032259	Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type	Family
IA [auth z]	IPR045004	Enoyl-CoA hydratase/isomerase domain	Domain
JA [auth y]	IPR019832	Manganese/iron superoxide dismutase, C-terminal	Domain
JA [auth y]	IPR047002	T-complex protein 10, C-terminal domain superfamily	Homologous Superfamily
JA [auth y]	IPR036314	Manganese/iron superoxide dismutase, C-terminal domain superfamily	Homologous Superfamily
LA [auth w]	IPR039603	Small ribosomal subunit protein mS41	Family
LA [auth w]	IPR019083	IGR domain	Domain
XA [auth a]	IPR005324	Small ribosomal subunit protein uS5, C-terminal	Domain
AB [auth k]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
AB [auth k]	IPR000266	Small ribosomal subunit protein uS17	Family
BB [auth be]	IPR035306	Small ribosomal subunit protein uS12m	Family