Annotations: 7ABS

Structure of human DCLRE1C/Artemis in complex with DNA - re-evaluation of 6WO0

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	CBFD_NFYB_HMF	e7absA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: CBFD_NFYB_HMF	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF07522	DNA repair metallo-beta-lactamase (DRMBL)	DNA repair metallo-beta-lactamase	The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in Pfam:PF00753 and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fift ...	The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in Pfam:PF00753 and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in DNA repair [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth E]	DNA (5'-D(CPAPGPC)-3')	-	-	-
B	DNA (5'-D(PGPCPGPAPTPCPAPGPCPT)-3')	-	-	-
A	Protein artemis	DNA endonuclease activity endonuclease activity single-stranded DNA endonuclease activity hydrolase activity, acting on ester bonds catalytic activity, acting on DNA nuclease activity catalytic activity, acting on a nucleic acid hydrolase activity catalytic activity DNA nuclease activity 5'-3' exonuclease activity exonuclease activity DNA exonuclease activity 5'-3' DNA exonuclease activity DNA endonuclease activity endonuclease activity single-stranded DNA endonuclease activity hydrolase activity, acting on ester bonds catalytic activity, acting on DNA nuclease activity catalytic activity, acting on a nucleic acid hydrolase activity catalytic activity DNA nuclease activity 5'-3' exonuclease activity exonuclease activity DNA exonuclease activity 5'-3' DNA exonuclease activity DNA exonuclease activity, producing 5'-phosphomonoesters DNA binding binding damaged DNA binding nucleic acid binding	cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process interstrand cross-link repair macromolecule metabolic process DNA repair cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process interstrand cross-link repair macromolecule metabolic process DNA repair double-strand break repair double-strand break repair via nonhomologous end joining telomere organization chromosome organization telomere maintenance cellular component organization organelle organization cellular component organization or biogenesis	protein-containing complex nonhomologous end joining complex catalytic complex intracellular protein-containing complex DNA repair complex membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm protein-containing complex nonhomologous end joining complex catalytic complex intracellular protein-containing complex DNA repair complex membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Homologous Superfamily
A	IPR011084	DNA repair metallo-beta-lactamase	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: Q96SD1	Omenn syndrome severe combined immunodeficiency due to DCLRE1C deficiency Reticuloendotheliosis, familial, with eosinophilia adrenal cortex carcinoma B-cell chronic lymphocytic leukemia malignant ependymoma osteosarcoma pancreatic intraductal papillary-mucinous carcinoma severe combined immunodeficiency astrocytic tumor hepatocellular carcinoma oligodendroglioma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm lung cancer Omenn syndrome severe combined immunodeficiency due to DCLRE1C deficiency Reticuloendotheliosis, familial, with eosinophilia adrenal cortex carcinoma B-cell chronic lymphocytic leukemia malignant ependymoma osteosarcoma pancreatic intraductal papillary-mucinous carcinoma severe combined immunodeficiency astrocytic tumor hepatocellular carcinoma oligodendroglioma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm lung cancer pancreatic ductal adenocarcinoma