6YDP

55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth BV]SCOP2B Superfamilyl21p-like 8082451 3002005 SCOP2B (2021-05-27)
F [auth BY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8082519 3000334 SCOP2B (2021-05-27)
EA [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063848 3001397 SCOP2B (2021-05-27)
LA [auth AK]SCOP2 FamilyRibosomal protein L18p and S11 8096615 4000555 SCOP2 (2021-05-27)
LA [auth AK]SCOP2 SuperfamilyTranslational machinery components 8096616 3000571 SCOP2 (2021-05-27)
MA [auth AL]SCOP2 FamilyCold shock DNA-binding domain-like 8096283 4001909 SCOP2 (2021-05-27)
MA [auth AL]SCOP2 SuperfamilyNucleic acid-binding proteins 8096284 3000135 SCOP2 (2021-05-27)
SA [auth AU]SCOP2B SuperfamilyRibosomal protein S21 8083456 3002159 SCOP2B (2021-05-27)
WA [auth Aa]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S22-like 8096620 3002074 SCOP2B (2021-05-27)
EB [auth Ah]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S31-like 8090912 3002471 SCOP2B (2021-05-27)
ZB [auth B9]SCOP2B SuperfamilyRibosomal protein L36 8083322 3001346 SCOP2B (2021-05-27)
FC [auth BF]SCOP2 FamilyRibosomal protein L4 8096625 4003628 SCOP2 (2021-05-27)
FC [auth BF]SCOP2 SuperfamilyRibosomal protein L4 8096626 3001146 SCOP2 (2021-05-27)
GC [auth BI]SCOP2B SuperfamilyL9 N-domain-like 8070579 3000338 SCOP2B (2021-05-27)
JC [auth BN]SCOP2B SuperfamilyRibosomal protein L13 8098010 3001134 SCOP2B (2021-05-27)
MC [auth BQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8076055 3000884 SCOP2B (2021-05-27)
PC [auth BT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8089132 3000334 SCOP2B (2021-05-27)
NA [auth AN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052589 3000068 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B0]PF01016e6ydpB01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
B [auth BU]PF00453e6ydpBU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
C [auth BV]PF00829e6ydpBV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
D [auth BW]PF00237e6ydpBW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
E [auth BX]PF00276e6ydpBX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
F [auth BY]PF00467,PF17136e6ydpBY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
G [auth Ba]PF07147e6ydpBa1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
H [auth Bb]PF01161e6ydpBb1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PF01161ECOD (1.6)
I [auth Bc]PF02824e6ydpBc2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF02824ECOD (1.6)
I [auth Bc]F_UNCLASSIFIEDe6ydpBc1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: F_UNCLASSIFIEDECOD (1.6)
J [auth Bd]PF09812e6ydpBd1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: PF09812ECOD (1.6)
K [auth Be]PF09809e6ydpBe1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: PF09809ECOD (1.6)
L [auth Bf]PF10210e6ydpBf1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: PF10210ECOD (1.6)
M [auth Bg]PF05047e6ydpBg1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
N [auth Bh]PF22935e6ydpBh1 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: PF22935ECOD (1.6)
N [auth Bh]PF22892e6ydpBh2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF22892ECOD (1.6)
O [auth Bi]PF04280e6ydpBi1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF04280ECOD (1.6)
Q [auth Bk]PF00338e6ydpBk1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
R [auth Bl]PF05046e6ydpBl1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: PF05046ECOD (1.6)
S [auth Bm]PF10501e6ydpBm1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF10501ECOD (1.6)
T [auth Bn]PF10244e6ydpBn1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: PF10244ECOD (1.6)
U [auth Bo]PF18699e6ydpBo1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: PF18699ECOD (1.6)
V [auth Bp]PF10780e6ydpBp1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF10780ECOD (1.6)
X [auth Bt]PF14978e6ydpBt1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: PF14978ECOD (1.6)
Y [auth Bu]PF00472e6ydpBu1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF00472ECOD (1.6)
Z [auth Bv]PF10147e6ydpBv1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: PF10147ECOD (1.6)
BA [auth B1]PF00830e6ydpB11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Mitoribosomal protein bL28mF: PF00830ECOD (1.6)
EA [auth AB]PF00318e6ydpAB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
FA [auth AC]PF14955e6ydpAC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF14955ECOD (1.6)
GA [auth AE]PF03719e6ydpAE1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
GA [auth AE]PF00333e6ydpAE2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
GA [auth AE]PF21251e6ydpAE3 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF21251ECOD (1.6)
HA [auth AF]PF01250e6ydpAF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
IA [auth AG]PF00177e6ydpAG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
JA [auth AI]PF00380e6ydpAI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
KA [auth AJ]PF00338e6ydpAJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
LA [auth AK]PF00411e6ydpAK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
MA [auth AL]PF00164e6ydpAL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
OA [auth AO]PF00312e6ydpAO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
PA [auth AP]PF00886e6ydpAP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
RA [auth AR]PF01084e6ydpAR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
SA [auth AU]PF01165e6ydpAU1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: PF01165ECOD (1.6)
WA [auth Aa]PF10245e6ydpAa1 A: a+b complex topologyX: Mitoribosomal protein mS22 (From Topology)H: Mitoribosomal protein mS22 (From Topology)T: Mitoribosomal protein mS22F: PF10245ECOD (1.6)
XA [auth Ab]PF10484e6ydpAb1 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: PF10484ECOD (1.6)
YA [auth Ac]PF05047e6ydpAc1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
ZA [auth Ad]PF14943e6ydpAd1 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: PF14943ECOD (1.6)
AB [auth Ae]PF10037e6ydpAe1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF10037ECOD (1.6)
BB [auth Af]PF10246e6ydpAf1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF10246ECOD (1.6)
CB [auth B2]PF06984e6ydpB21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF06984ECOD (1.6)
DB [auth Ag]PF10236e6ydpAg2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF10236ECOD (1.6)
DB [auth Ag]PF10236e6ydpAg1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF10236ECOD (1.6)
EB [auth Ah]PF15433e6ydpAh1 A: extended segmentsX: Mitoribosomal protein mS31 (From Topology)H: Mitoribosomal protein mS31 (From Topology)T: Mitoribosomal protein mS31F: PF15433ECOD (1.6)
FB [auth Ai]PF08293e6ydpAi1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: PF08293ECOD (1.6)
GB [auth Aj]PF16053e6ydpAj1 A: beta barrelsX: SH3H: Mitoribosomal protein mS34 (From Topology)T: Mitoribosomal protein mS34F: PF16053ECOD (1.6)
HB [auth Ak]PF10213e6ydpAk1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF10213ECOD (1.6)
IB [auth Am]PF06747e6ydpAm1 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: PF06747ECOD (1.6)
JB [auth An]PF08213e6ydpAn1 A: extended segmentsX: Mitoribosomal protein mS38 (From Topology)H: Mitoribosomal protein mS38 (From Topology)T: Mitoribosomal protein mS38F: PF08213ECOD (1.6)
MB [auth CL]PF16320e6ydpCL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
NB [auth DL]PF16320e6ydpDL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
OB [auth EL]PF16320e6ydpEL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
PB [auth FL]PF16320e6ydpFL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
QB [auth GL]PF16320e6ydpGL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
RB [auth HL]PF16320e6ydpHL1 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: PF16320ECOD (1.6)
SB [auth LL]PF00542e6ydpLL1 A: a+b two layersX: ClpS-likeH: ClpS-related (From Topology)T: ClpS-relatedF: PF00542ECOD (1.6)
TB [auth B3]PF00327e6ydpB31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
UB [auth B4]PF09776e6ydpB41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF09776ECOD (1.6)
VB [auth B5]PF01783e6ydpB51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
WB [auth B6]PF00471e6ydpB61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
XB [auth B7]PF00468e6ydpB71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
YB [auth B8]PF01632e6ydpB81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
ZB [auth B9]PF00444e6ydpB91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
CC [auth BC]PF03144e6ydpBC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF03144ECOD (1.6)
CC [auth BC]PF03764e6ydpBC5 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03764ECOD (1.6)
CC [auth BC]PF00679e6ydpBC2 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF00679ECOD (1.6)
CC [auth BC]PF14492e6ydpBC3 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF14492ECOD (1.6)
CC [auth BC]PF00009e6ydpBC4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00009ECOD (1.6)
DC [auth BD]PF00181e6ydpBD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
DC [auth BD]PF03947e6ydpBD2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
EC [auth BE]PF00297e6ydpBE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
FC [auth BF]PF00573e6ydpBF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
GC [auth BI]PF01281e6ydpBI1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
IC [auth BK]PF00298e6ydpBK1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
IC [auth BK]PF03946e6ydpBK2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
JC [auth BN]PF00572e6ydpBN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
KC [auth BO]PF00238e6ydpBO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
LC [auth BP]PF00828e6ydpBP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
MC [auth BQ]PF00252e6ydpBQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
NC [auth BR]PF01196e6ydpBR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
OC [auth BS]PF00861e6ydpBS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
PC [auth BT]PF01245e6ydpBT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
P [auth Bj]PF11788e6ydpBj1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: PF11788ECOD (1.6)
AA [auth Bw]PF07147e6ydpBw1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
CA [auth Bx]PF01084e6ydpBx1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
NA [auth AN]PF00253e6ydpAN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
QA [auth AQ]PF00366e6ydpAQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
LB [auth Ap]PF01084e6ydpAp1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth BU]PF00472RF-1 domain (RF-1)RF-1 domain- Family
B [auth BU]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
C [auth BV]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
D [auth BW]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
E [auth BX]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
F [auth BY]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
F [auth BY]PF00467KOW motif (KOW)KOW motif- Family
BA [auth B1]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
AC [auth BA],
DA [auth AA]
PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
AC [auth BA],
DA [auth AA]
PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
EA [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
EA [auth AB]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
FA [auth AC]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
FA [auth AC]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
GA [auth AE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
GA [auth AE]PF21251Small ribosomal subunit protein uS5m, N-terminal (Ribosomal_uS5m_N)Small ribosomal subunit protein uS5m, N-terminalThis entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the m ...This entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].
Domain
GA [auth AE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
IA [auth AG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
IA [auth AG]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
JA [auth AI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
JA [auth AI]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
KA [auth AJ]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
KA [auth AJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
LA [auth AK]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
LA [auth AK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
MA [auth AL]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
OA [auth AO]PF22330Small ribosomal subunit protein mS39, PPR (Rib_mS39_PPR)Small ribosomal subunit protein mS39, PPR- Repeat
OA [auth AO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
PA [auth AP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
PA [auth AP]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
RA [auth AR]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
SA [auth AU]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
CB [auth B2]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1].Domain
PF00542Ribosomal protein L7/L12 C-terminal domain (Ribosomal_L12)Ribosomal protein L7/L12 C-terminal domain- Domain
TB [auth B3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
VB [auth B5]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
XB [auth B7]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
ZB [auth B9]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
CC [auth BC]PF00679Elongation factor G C-terminus (EFG_C)Elongation factor G C-terminusThis domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold.Domain
CC [auth BC]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
CC [auth BC]PF14492Elongation Factor G, domain III (EFG_III)Elongation Factor G, domain IIIThis domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1].Domain
CC [auth BC]PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
CC [auth BC]PF03764Elongation factor G, domain IV (EFG_IV)Elongation factor G, domain IVThis domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold.Domain
DC [auth BD]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
EC [auth BE]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
FC [auth BF]PF10210Mitochondrial 28S ribosomal protein S32 (MRP-S32)Mitochondrial 28S ribosomal protein S32- Family
FC [auth BF]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
GC [auth BI]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
GC [auth BI]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
HC [auth BJ]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
HC [auth BJ]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
IC [auth BK]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
IC [auth BK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
JC [auth BN]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
JC [auth BN]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
KC [auth BO]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
KC [auth BO]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
MC [auth BQ]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
MC [auth BQ]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
NC [auth BR]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
OC [auth BS]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
PC [auth BT]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
PC [auth BT]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
NA [auth AN]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
QA [auth AQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B0]Mitochondrial ribosomal protein L27
B [auth BU]Mitochondrial ribosomal protein L20
C [auth BV]Mitochondrial ribosomal protein L21
D [auth BW]uL22m
E [auth BX]uL23m---
F [auth BY]uL24m
G [auth Ba]Mitochondrial ribosomal protein L37
H [auth Bb]Mitochondrial ribosomal protein L38- -
I [auth Bc]Mitochondrial ribosomal protein L39 -
J [auth Bd]Uncharacterized protein- -
K [auth Be]Mitochondrial ribosomal protein L41
L [auth Bf]mL42- -
M [auth Bg]Mitochondrial ribosomal protein L43
N [auth Bh]mL44
O [auth Bi]Mitochondrial ribosomal protein L45- -
Q [auth Bk]39S ribosomal protein L48, mitochondrial- -
R [auth Bl]Mrpl34
S [auth Bm]Mitochondrial ribosomal protein L50- -
T [auth Bn]Mitochondrial ribosomal protein L51
U [auth Bo]mL52
V [auth Bp]mL53---
W [auth Bq]mL54 -
X [auth Bt]Mitochondrial ribosomal protein L57
Y [auth Bu]mL62 (ICT1)
Z [auth Bv]mL64-
BA [auth B1]Mitochondrial ribosomal protein L28 -
AC [auth BA],
DA [auth AA]
12S rRNA---
EA [auth AB]Mitochondrial ribosomal protein S2
FA [auth AC]Mitochondrial ribosomal protein S24-
GA [auth AE]Mitochondrial ribosomal protein S5
HA [auth AF]bS6m---
IA [auth AG]Mitochondrial ribosomal protein S7
JA [auth AI]uS9m
KA [auth AJ]Mitochondrial ribosomal protein S10- -
LA [auth AK]uS11m
MA [auth AL]Mitochondrial ribosomal protein S12
OA [auth AO]uS15m
PA [auth AP]28S ribosomal protein S16, mitochondrial
RA [auth AR]Mitochondrial ribosomal protein S18C
SA [auth AU]bS21m
TA [auth AV]fMet-tRNAMet (P site)---
UA [auth AX]mRNA---
VA [auth AZ]unknown peptide---
WA [auth Aa]Mitochondrial ribosomal protein S22 -
XA [auth Ab]mS23
YA [auth Ac]Mitochondrial ribosomal protein S25 -
ZA [auth Ad]Mitochondrial ribosomal protein S26 -
AB [auth Ae]Mitochondrial ribosomal protein S27- -
BB [auth Af]Mitoribosomal protein ms28, mrps28-
CB [auth B2]Mitochondrial ribosomal protein L47
DB [auth Ag]Death associated protein 3
EB [auth Ah]Mitochondrial ribosomal protein S31 -
FB [auth Ai]mS33- -
GB [auth Aj]mS34
HB [auth Ak]Mitochondrial ribosomal protein S35
IB [auth Am]mS37
JB [auth An]Aurora kinase A interacting protein 1-
KB [auth Ao]Pentatricopeptide repeat domain 3
Mitochondrial ribosomal protein L12
TB [auth B3]uL30m
UB [auth B4]bL31m
VB [auth B5]bL32m
WB [auth B6]bL33m
XB [auth B7]Mitochondrial ribosomal protein L34
YB [auth B8]Mitochondrial ribosomal protein L35- -
ZB [auth B9]Ribosomal protein
BC [auth BB]CP tRNAPhe---
CC [auth BC]Elongation factor G, mitochondrial
DC [auth BD]uL2m
EC [auth BE]ICT1
FC [auth BF]Mitochondrial ribosomal protein L4
GC [auth BI]Mitochondrial ribosomal protein L9
HC [auth BJ]Mitochondrial ribosomal protein L10
IC [auth BK]Mitochondrial ribosomal protein L11
JC [auth BN]uL13m
KC [auth BO]uL14m
LC [auth BP]uL15m---
MC [auth BQ]uL16m
NC [auth BR]Uncharacterized protein
OC [auth BS]Mitochondrial ribosomal protein L18
PC [auth BT]Mitochondrial ribosomal protein L19
P [auth Bj]Mitochondrial ribosomal protein L46 -
AA [auth Bw]39S ribosomal protein S30, mitochondrial
CA [auth Bx]Mitochondrial ribosomal protein S18A
NA [auth AN]Mitochondrial ribosomal protein S14
QA [auth AQ]uS17m
LB [auth Ap]28S ribosomal protein S18b, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B0]IPR001684Large ribosomal subunit protein bL27Family
B [auth BU]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
B [auth BU]IPR005813Large ribosomal subunit protein bL20Family
C [auth BV]IPR028909Large ribosomal subunit protein bL21-likeFamily
C [auth BV]IPR001787Large ribosomal subunit protein bL21Family
C [auth BV]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
D [auth BW]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
D [auth BW]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
D [auth BW]IPR001063Large ribosomal subunit protein uL22Family
F [auth BY]IPR003256Large ribosomal subunit protein uL24Family
F [auth BY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
F [auth BY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth BY]IPR005824KOWDomain
F [auth BY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
F [auth BY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
G [auth Ba]IPR010793Large ribosomal subunit protein mL37/mL65Family
H [auth Bb]IPR036610PEBP-like superfamilyHomologous Superfamily
H [auth Bb]IPR008914Phosphatidylethanolamine-binding proteinFamily
H [auth Bb]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
I [auth Bc]IPR012676TGS-likeHomologous Superfamily
I [auth Bc]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
I [auth Bc]IPR004095TGSDomain
I [auth Bc]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
J [auth Bd]IPR019192Large ribosomal subunit protein mL40Family
J [auth Bd]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
K [auth Be]IPR019189Large ribosomal subunit protein mL41Family
L [auth Bf]IPR019346Large ribosomal subunit protein mL42Family
M [auth Bg]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
M [auth Bg]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
M [auth Bg]IPR039927Large ribosomal subunit protein mL43Family
N [auth Bh]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
N [auth Bh]IPR014720Double-stranded RNA-binding domainDomain
N [auth Bh]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
O [auth Bi]IPR032710NTF2-like domain superfamilyHomologous Superfamily
O [auth Bi]IPR007379Tim44-like domainDomain
Q [auth Bk]IPR027486Small ribosomal subunit protein uS10 domainDomain
Q [auth Bk]IPR027487Large ribosomal subunit protein mL48Family
Q [auth Bk]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
R [auth Bl]IPR007740Large ribosomal subunit protein mL49Family
S [auth Bm]IPR018305Large ribosomal subunit protein mL50Family
T [auth Bn]IPR019373Large ribosomal subunit protein mL51Family
U [auth Bo]IPR034596Large ribosomal subunit protein mL52Family
W [auth Bq]IPR013870Large ribosomal subunit protein mL54Family
X [auth Bt]IPR016576Large ribosomal subunit protein mL63Family
Y [auth Bu]IPR000352Peptide chain release factor class IDomain
Z [auth Bv]IPR018472Large ribosomal subunit protein mL64Family
Z [auth Bv]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
BA [auth B1]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
BA [auth B1]IPR026569Large ribosomal subunit protein bL28Family
BA [auth B1]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
EA [auth AB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
EA [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
EA [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
EA [auth AB]IPR001865Small ribosomal subunit protein uS2Family
FA [auth AC]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
GA [auth AE]IPR000851Small ribosomal subunit protein uS5Family
GA [auth AE]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
GA [auth AE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
GA [auth AE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
GA [auth AE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
GA [auth AE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
GA [auth AE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IA [auth AG]IPR000235Small ribosomal subunit protein uS7Family
IA [auth AG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
IA [auth AG]IPR023798Small ribosomal subunit protein uS7 domainDomain
JA [auth AI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
JA [auth AI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
JA [auth AI]IPR000754Small ribosomal subunit protein uS9Family
JA [auth AI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
KA [auth AJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
KA [auth AJ]IPR040055Small ribosomal subunit protein uS10mFamily
KA [auth AJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
LA [auth AK]IPR001971Small ribosomal subunit protein uS11Family
LA [auth AK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
LA [auth AK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
MA [auth AL]IPR006032Small ribosomal subunit protein uS12Family
MA [auth AL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth AL]IPR005679Ribosomal protein uS12, bacterial-typeFamily
OA [auth AO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
OA [auth AO]IPR000589Small ribosomal subunit protein uS15Family
PA [auth AP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
PA [auth AP]IPR000307Small ribosomal subunit protein bS16Family
RA [auth AR]IPR001648Small ribosomal subunit protein bS18Family
RA [auth AR]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
RA [auth AR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
SA [auth AU]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
SA [auth AU]IPR001911Small ribosomal subunit protein bS21Family
WA [auth Aa]IPR019374Small ribosomal subunit protein mS22Family
XA [auth Ab]IPR023611Small ribosomal subunit protein mS23, conserved domainDomain
XA [auth Ab]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
YA [auth Ac]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
YA [auth Ac]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
YA [auth Ac]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
ZA [auth Ad]IPR002012Gonadotropin-releasing hormoneConserved Site
ZA [auth Ad]IPR019792GonadoliberinFamily
AB [auth Ae]IPR019266Small ribosomal subunit protein mS27Family
AB [auth Ae]IPR034913mS27/PTCD2Family
BB [auth Af]IPR019375Small ribosomal subunit protein bS1mFamily
CB [auth B2]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
CB [auth B2]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
DB [auth Ag]IPR008092Small ribosomal subunit protein mS29, metazoan-typeFamily
DB [auth Ag]IPR019368Small ribosomal subunit protein mS29Family
DB [auth Ag]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
EB [auth Ah]IPR026299Mitochondrial 28S ribosomal protein S31Family
FB [auth Ai]IPR013219Small ribosomal subunit protein mS33Family
GB [auth Aj]IPR032053Small ribosomal subunit protein mS34Family
HB [auth Ak]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
HB [auth Ak]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
IB [auth Am]IPR010625CHCHDomain
IB [auth Am]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
IB [auth Am]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
JB [auth An]IPR013177Ribosomal protein mS38, C-terminalDomain
KB [auth Ao]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
KB [auth Ao]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
KB [auth Ao]IPR002885Pentatricopeptide repeatRepeat
IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
IPR000206Large ribosomal subunit protein bL12Family
TB [auth B3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
TB [auth B3]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
TB [auth B3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
UB [auth B4]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
UB [auth B4]IPR018615Large ribosomal subunit protein mL55Family
VB [auth B5]IPR002677Large ribosomal subunit protein bL32Family
VB [auth B5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WB [auth B6]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WB [auth B6]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
WB [auth B6]IPR001705Large ribosomal subunit protein bL33Family
XB [auth B7]IPR000271Large ribosomal subunit protein bL34Family
YB [auth B8]IPR019338Large ribosomal subunit protein bL35mFamily
ZB [auth B9]IPR000473Large ribosomal subunit protein bL36Family
ZB [auth B9]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
CC [auth BC]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
CC [auth BC]IPR004540Translation elongation factor EFG/EF2Family
CC [auth BC]IPR000795Translational (tr)-type GTP-binding domainDomain
CC [auth BC]IPR000640Elongation factor EFG, domain V-likeDomain
CC [auth BC]IPR031157Tr-type G domain, conserved siteConserved Site
CC [auth BC]IPR009022Elongation factor G, domain IIIDomain
CC [auth BC]IPR035647EF-G domain III/V-likeHomologous Superfamily
CC [auth BC]IPR041095Elongation Factor G, domain IIDomain
CC [auth BC]IPR004161Translation elongation factor EFTu-like, domain 2Domain
CC [auth BC]IPR047872Elongation factor G, domain IVDomain
CC [auth BC]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
CC [auth BC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
CC [auth BC]IPR005225Small GTP-binding protein domainDomain
CC [auth BC]IPR035649EFG, domain VDomain
CC [auth BC]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
CC [auth BC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
DC [auth BD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DC [auth BD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DC [auth BD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
DC [auth BD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DC [auth BD]IPR002171Large ribosomal subunit protein uL2Family
EC [auth BE]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
EC [auth BE]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
EC [auth BE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EC [auth BE]IPR000597Large ribosomal subunit protein uL3Family
FC [auth BF]IPR013005Large ribosomal subunit protein uL4-likeFamily
FC [auth BF]IPR002136Large ribosomal subunit protein uL4Family
FC [auth BF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
GC [auth BI]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
GC [auth BI]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
GC [auth BI]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
GC [auth BI]IPR000244Large ribosomal subunit protein bL9Family
HC [auth BJ]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
HC [auth BJ]IPR001790Large ribosomal subunit protein uL10Family
HC [auth BJ]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
IC [auth BK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
IC [auth BK]IPR000911Ribosomal protein uL11Family
IC [auth BK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
IC [auth BK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
JC [auth BN]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
JC [auth BN]IPR005822Large ribosomal subunit protein uL13Family
JC [auth BN]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
JC [auth BN]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
KC [auth BO]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
KC [auth BO]IPR000218Large ribosomal subunit protein uL14Family
MC [auth BQ]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
MC [auth BQ]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
MC [auth BQ]IPR016180Large ribosomal subunit protein uL16 domainDomain
MC [auth BQ]IPR047873Large ribosomal subunit protein uL16Family
NC [auth BR]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
NC [auth BR]IPR000456Large ribosomal subunit protein bL17Family
OC [auth BS]IPR005484Large ribosomal subunit protein uL18Family
OC [auth BS]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
PC [auth BT]IPR001857Large ribosomal subunit protein bL19Family
PC [auth BT]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
PC [auth BT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth Bj]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
P [auth Bj]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
P [auth Bj]IPR040008Large ribosomal subunit protein mL46Family
P [auth Bj]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
AA [auth Bw]IPR039982Large ribosomal subunit protein mL65Family
AA [auth Bw]IPR010793Large ribosomal subunit protein mL37/mL65Family
CA [auth Bx]IPR001648Small ribosomal subunit protein bS18Family
CA [auth Bx]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
NA [auth AN]IPR001209Small ribosomal subunit protein uS14Family
QA [auth AQ]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
QA [auth AQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QA [auth AQ]IPR000266Small ribosomal subunit protein uS17Family
LB [auth Ap]IPR040054Small ribosomal subunit protein mS40Family
LB [auth Ap]IPR001648Small ribosomal subunit protein bS18Family
LB [auth Ap]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily