6WX8
SOX2 bound to Importin-alpha 3
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6wx8a_ | All alpha proteins | alpha-alpha superhelix | ARM repeat | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d6wx8c_ | All alpha proteins | alpha-alpha superhelix | ARM repeat | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d6wx8b_ | All alpha proteins | HMG-box | HMG-box | HMG-box | Sox-2 | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D | d6wx8d_ | All alpha proteins | HMG-box | HMG-box | HMG-box | Sox-2 | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | ARM repeat-like | 8081895 | 3000116 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | ARM repeat-like | 8081895 | 3000116 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | HMG-box | 8037201 | 3001368 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | HMG-box | 8037201 | 3001368 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00514,PF16186 | e6wx8A1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF00514,PF16186 | ECOD (1.6) |
C | PF00514,PF16186 | e6wx8C1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF00514,PF16186 | ECOD (1.6) |
B | PF00505 | e6wx8B1 | A: alpha arrays | X: HMG-box (From Topology) | H: HMG-box (From Topology) | T: HMG-box | F: PF00505 | ECOD (1.6) |
D | PF00505 | e6wx8D1 | A: alpha arrays | X: HMG-box (From Topology) | H: HMG-box (From Topology) | T: HMG-box | F: PF00505 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00514 | Armadillo/beta-catenin-like repeat (Arm) | Armadillo/beta-catenin-like repeat | - | Repeat | |
PF16186 | Atypical Arm repeat (Arm_3) | Atypical Arm repeat | - | Repeat | |
PF00505 | HMG (high mobility group) box (HMG_box) | HMG (high mobility group) box | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002652 | Importin-alpha, importin-beta-binding domain | Domain | |
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR000225 | Armadillo | Repeat | |
IPR011989 | Armadillo-like helical | Homologous Superfamily | |
IPR024931 | Importin subunit alpha | Family | |
IPR036975 | Importin-alpha, importin-beta-binding domain superfamily | Homologous Superfamily | |
IPR032413 | Atypical Arm repeat | Repeat | |
IPR036910 | High mobility group box domain superfamily | Homologous Superfamily | |
IPR022097 | Transcription factor SOX | Family | |
IPR009071 | High mobility group box domain | Domain |