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 6TOP | pdb_00006top

Structure of the PorE C-terminal domain, a protein of T9SS from Porphyromonas gingivalis

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPyr_redox_3e6topD1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: Pyr_redox_3ECOD (v295.2)
CPyr_redox_3e6topC1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: Pyr_redox_3ECOD (v295.2)
BPyr_redox_3e6topB1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: Pyr_redox_3ECOD (v295.2)
APyr_redox_3e6topA1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: Pyr_redox_3ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, C, D
OmpA family protein- -
OmpA family protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B, C, D
IPR011042Six-bladed beta-propeller, TolB-likeHomologous Superfamily
B, C, D
IPR006664Outer membrane protein, bacterialDomain
B, C, D
IPR006665OmpA-like domainDomain
B, C, D
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
B, C, D
IPR019734Tetratricopeptide repeatRepeat
B, C, D
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
B, C, D
IPR008969Carboxypeptidase-like, regulatory domain superfamilyHomologous Superfamily
B, C, D
IPR036737OmpA-like domain superfamilyHomologous Superfamily
IPR011042Six-bladed beta-propeller, TolB-likeHomologous Superfamily
IPR006664Outer membrane protein, bacterialDomain
IPR006665OmpA-like domainDomain
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
IPR019734Tetratricopeptide repeatRepeat
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
IPR008969Carboxypeptidase-like, regulatory domain superfamilyHomologous Superfamily
IPR036737OmpA-like domain superfamilyHomologous Superfamily