Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AUNK_F_TYPEe6slnA1 A: beta barrelsX: Outer membrane meander beta-barrelsH: PorinsT: Ligand-gated protein channelF: UNK_F_TYPEECOD (1.6)
APluge6slnA2 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: TonB-dependent receptor plug domain (From Topology)T: TonB-dependent receptor plug domainF: PlugECOD (1.6)
BUNK_F_TYPEe6slnB1 A: beta barrelsX: Outer membrane meander beta-barrelsH: PorinsT: Ligand-gated protein channelF: UNK_F_TYPEECOD (1.6)
BPluge6slnB2 A: a+b complex topologyX: N0 domain in phage tail proteins and secretins-likeH: TonB-dependent receptor plug domain (From Topology)T: TonB-dependent receptor plug domainF: PlugECOD (1.6)
CSusD_RagBe6slnC1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: SusD_RagBECOD (1.6)
DSusD_RagBe6slnD1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: SusD_RagBECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00593TonB dependent receptor-like, beta-barrel (TonB_dep_Rec_b-barrel)TonB dependent receptor-like, beta-barrelThis entry represents the beta-barrel domain of TonB-dependent receptors, such as BtuB, CirA, FatA, FcuT, FecA, FepA, among others [1].Domain
C, D
PF07980SusD family (SusD_RagB)SusD family- Repeat
C, D
PF14322Starch-binding associating with outer membrane (SusD-like_3)Starch-binding associating with outer membrane- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
RagA protein- -
C, D
Lipoprotein RagB- -
E [auth P],
F [auth Q]
GLN-THR-ALA-GLY-ALA-ASN-SER-GLN-ARG-GLY-SER-ALA-GLY---

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage