Structure of the RagAB peptide transporter


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DBeta-lactamasee6sljD1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Beta-lactamaseECOD (v294.1)
CBeta-lactamasee6sljC1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Beta-lactamaseECOD (v294.1)
B [auth A]Beta-lactamasee6sljA1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Beta-lactamaseECOD (v294.1)
A [auth B]Beta-lactamasee6sljB1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: Beta-lactamaseECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, D
PF07980SusD family (SusD_RagB)SusD family- Repeat
C, D
PF14322Starch-binding associating with outer membrane (SusD-like_3)Starch-binding associating with outer membrane- Repeat
A [auth B],
B [auth A]
PF00593TonB dependent receptor-like, beta-barrel (TonB_dep_Rec_b-barrel)TonB dependent receptor-like, beta-barrelThis entry represents the beta-barrel domain of TonB-dependent receptors, such as BtuB, CirA, FatA, FcuT, FecA, FepA, among others [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage