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Structure of the RagAB peptide transporter External Resource: Annotation Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) D Beta-lactamase e6sljD1 A: alpha arrays X: putative RnfG subunit of electron transport complex H: putative RnfG subunit of electron transport complex T: Aspartate/ornithine carbamoyltransferase F: Beta-lactamase ECOD (v295.2) C Beta-lactamase e6sljC1 A: alpha arrays X: putative RnfG subunit of electron transport complex H: putative RnfG subunit of electron transport complex T: Aspartate/ornithine carbamoyltransferase F: Beta-lactamase ECOD (v295.2) B [auth A] Beta-lactamase e6sljA1 A: alpha arrays X: putative RnfG subunit of electron transport complex H: putative RnfG subunit of electron transport complex T: Aspartate/ornithine carbamoyltransferase F: Beta-lactamase ECOD (v295.2) A [auth B] Beta-lactamase e6sljB1 A: alpha arrays X: putative RnfG subunit of electron transport complex H: putative RnfG subunit of electron transport complex T: Aspartate/ornithine carbamoyltransferase F: Beta-lactamase ECOD (v295.2)
Chains Accession Name Description Comments Source PF07980 SusD family (SusD_RagB) SusD family - Repeat PF14322 Starch-binding associating with outer membrane (SusD-like_3) Starch-binding associating with outer membrane - Repeat A [auth B] ,B [auth A] PF00593 TonB dependent receptor-like, beta-barrel (TonB_dep_Rec_b-barrel) TonB dependent receptor-like, beta-barrel This entry represents the beta-barrel domain of TonB-dependent receptors, such as BtuB, CirA, FatA, FcuT, FecA, FepA, among others [1]. Domain
Chains Polymer Molecular Function Biological Process Cellular Component F [auth Q] ALA-SER-THR-THR-GLY-ALA-ASN-SER-GLN-ARG - - - E [auth P] ALA-SER-THR-THR-GLY-ALA-ASN-SER-GLN-ARG-GLY-SER-GLY - - - Lipoprotein RagB - - A [auth B] ,B [auth A] RagA protein - -
Chains Accession Name Type IPR012944 RagB/SusD domain Domain IPR011990 Tetratricopeptide-like helical domain superfamily Homologous Superfamily IPR033985 SusD-like, N-terminal Domain A [auth B] ,B [auth A] IPR039426 TonB-dependent receptor-like Family A [auth B] ,B [auth A] IPR037066 TonB-dependent receptor, plug domain superfamily Homologous Superfamily A [auth B] ,B [auth A] IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Homologous Superfamily A [auth B] ,B [auth A] IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site Conserved Site A [auth B] ,B [auth A] IPR023996 TonB-dependent outer membrane protein, SusC/RagA Family A [auth B] ,B [auth A] IPR000531 TonB-dependent receptor-like, beta-barrel Domain A [auth B] ,B [auth A] IPR012910 TonB-dependent receptor, plug domain Domain A [auth B] ,B [auth A] IPR008969 Carboxypeptidase-like, regulatory domain superfamily Homologous Superfamily