6MKZ
Crystal structure of murine 4-1BB/4-1BBL complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TNF | e6mkzA1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: TNF | ECOD (1.6) |
C | TNF | e6mkzC1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: TNF | ECOD (1.6) |
B | TNFRSF14 | e6mkzB2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: TNFRSF14 | ECOD (1.6) |
B | UNK_F_TYPE | e6mkzB3 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: UNK_F_TYPE | ECOD (1.6) |
D | TNFRSF14 | e6mkzD2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: TNFRSF14 | ECOD (1.6) |
D | UNK_F_TYPE | e6mkzD1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
C | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00229 | TNF(Tumour Necrosis Factor) family (TNF) | TNF(Tumour Necrosis Factor) family | - | Domain | |
PF00020 | TNFR/NGFR cysteine-rich region (TNFR_c6) | TNFR/NGFR cysteine-rich region | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008983 | Tumour necrosis factor-like domain superfamily | Homologous Superfamily | |
IPR006052 | Tumour necrosis factor domain | Domain | |
IPR021184 | Tumour necrosis factor, conserved site | Conserved Site | |
IPR042373 | Tumor necrosis factor ligand superfamily member 9 | Family | |
IPR001368 | TNFR/NGFR cysteine-rich region | Domain | |
IPR020413 | Tumour necrosis factor receptor 9 | Family | |
IPR034020 | Tumour necrosis factor receptor 9, N-terminal | Domain |