6K4M

Cryo-EM structure of Holo-bacterioferritin form-II from Streptomyces coelicolor

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
E [auth F]	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
F [auth E]	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Ferritin-like	8075766	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Ferritin	e6k4mA1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
B	Ferritin	e6k4mB1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
C	Ferritin	e6k4mC1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
D	Ferritin	e6k4mD1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
E [auth F]	Ferritin	e6k4mF1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
F [auth E]	Ferritin	e6k4mE1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
G	Ferritin	e6k4mG1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
H	Ferritin	e6k4mH1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
I	Ferritin	e6k4mI1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
J	Ferritin	e6k4mJ1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
K	Ferritin	e6k4mK1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
L	Ferritin	e6k4mL1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
N	Ferritin	e6k4mN1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
P	Ferritin	e6k4mP1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
Q	Ferritin	e6k4mQ1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
R	Ferritin	e6k4mR1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
S	Ferritin	e6k4mS1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
T	Ferritin	e6k4mT1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
U	Ferritin	e6k4mU1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
V	Ferritin	e6k4mV1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
W	Ferritin	e6k4mW1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
X	Ferritin	e6k4mX1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
M	Ferritin	e6k4mM1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)
O	Ferritin	e6k4mO1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: Ferritin	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	PF00210	Ferritin-like domain (Ferritin)	Ferritin-like domain	This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	Bacterioferritin	cation binding ferric iron binding transition metal ion binding iron ion binding ion binding binding metal ion binding small molecule binding organic cyclic compound binding tetrapyrrole binding heme binding oxidoreductase activity, acting on metal ions oxidoreductase activity ferroxidase activity cation binding ferric iron binding transition metal ion binding iron ion binding ion binding binding metal ion binding small molecule binding organic cyclic compound binding tetrapyrrole binding heme binding oxidoreductase activity, acting on metal ions oxidoreductase activity ferroxidase activity oxidoreductase activity, acting on metal ions, oxygen as acceptor catalytic activity	cellular localization inorganic ion homeostasis homeostatic process sequestering of metal ion maintenance of location in cell maintenance of location localization intracellular iron ion homeostasis cellular homeostasis chemical homeostasis sequestering of iron ion intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis cellular localization inorganic ion homeostasis homeostatic process sequestering of metal ion maintenance of location in cell maintenance of location localization intracellular iron ion homeostasis cellular homeostasis chemical homeostasis sequestering of iron ion intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis cellular process intracellular sequestering of iron ion monoatomic cation homeostasis intracellular monoatomic ion homeostasis transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR009040	Ferritin-like diiron domain	Domain
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR002024	Bacterioferritin	Family
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR012347	Ferritin-like	Homologous Superfamily
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E], G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR008331	Ferritin/DPS protein domain	Domain