6DXO
1.8 A structure of RsbN-BldN complex.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Sigma70_r4_2 | e6dxoA2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Sigma70_r4_2 | ECOD (1.6) |
A | Sigma70_r2 | e6dxoA1 | A: alpha complex topology | X: Sigma2 domain-like | H: Sigma2 domain of RNA polymerase sigma factors (From Topology) | T: Sigma2 domain of RNA polymerase sigma factors | F: Sigma70_r2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08281 | Sigma-70, region 4 (Sigma70_r4_2) | Sigma-70, region 4 | Region 4 of sigma-70 like sigma-factors are involved in binding to the -35 promoter element via a helix-turn-helix motif [1]. | Domain | |
PF04542 | Sigma-70 region 2 (Sigma70_r2) | Sigma-70 region 2 | Region 2 of sigma-70 is the most conserved region of the entire protein. All members of this class of sigma-factor contain region 2. The high conservation is due to region 2 containing both the -10 promoter recognition helix and the primary core RNA ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR014284 | RNA polymerase sigma-70-like domain | Domain | |
IPR007627 | RNA polymerase sigma-70 region 2 | Domain | |
IPR039425 | RNA polymerase sigma-70-like | Family | |
IPR013249 | RNA polymerase sigma factor 70, region 4 type 2 | Domain | |
IPR013325 | RNA polymerase sigma factor, region 2 | Homologous Superfamily | |
IPR013324 | RNA polymerase sigma factor, region 3/4-like | Homologous Superfamily | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR014298 | ECF RNA polymerase sigma factor BldN-like | Family | |
B [auth D] | IPR043725 | Domain of unknown function DUF5667 | Domain |