6DF7
TAF1-BD2 in complex with Cpd27 (6-(but-3-en-1-yl)-4-(1-methyl-6-(morpholine-4-carbonyl)-1H-benzo[d]imidazol-4-yl)-1,6-dihydro-7H-pyrrolo[2,3-c]pyridin-7-one)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6df7a_ | All alpha proteins | Bromodomain-like | Bromodomain | automated matches | automated matches | Rabbit (Oryctolagus cuniculus ) [TaxId: 9986 ], | SCOPe (2.08) |
B | d6df7b_ | All alpha proteins | Bromodomain-like | Bromodomain | automated matches | automated matches | Rabbit (Oryctolagus cuniculus ) [TaxId: 9986 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00439 | e6df7A1 | A: alpha bundles | X: Bromodomain-like | H: Bromodomain (From Topology) | T: Bromodomain | F: PF00439 | ECOD (1.6) |
B | PF00439 | e6df7B1 | A: alpha bundles | X: Bromodomain-like | H: Bromodomain (From Topology) | T: Bromodomain | F: PF00439 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.920.10 | Mainly Alpha | Up-down Bundle | Histone Acetyltransferase | Chain A | CATH (4.3.0) |
B | 1.20.920.10 | Mainly Alpha | Up-down Bundle | Histone Acetyltransferase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00439 | Bromodomain (Bromodomain) | Bromodomain | Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR040240 | Transcription initiation factor TFIID subunit 1 | Family | |
IPR011177 | Transcription initiation factor TFIID subunit 1, animal | Family | |
IPR018359 | Bromodomain, conserved site | Conserved Site | |
IPR009067 | TAFII-230 TBP-binding | Domain | |
IPR001487 | Bromodomain | Domain | |
IPR036427 | Bromodomain-like superfamily | Homologous Superfamily | |
IPR041670 | Zinc knuckle | Domain | |
IPR022591 | Transcription initiation factor TFIID subunit 1, histone acetyltransferase domain | Domain | |
IPR036741 | TAFII-230 TBP-binding domain superfamily | Homologous Superfamily |