Crystal structure of the single chain variable fragment of the DH270.6 bnAb in complex with the Man9-V3 glycopeptide
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth P] | HATPase_c_5 | e6cbpP01 | A: beta barrels | X: Voltage-gated ion channels | H: Voltage-gated ion channels | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: HATPase_c_5 | ECOD (v294.2) |
| B [auth A] | ATP-synt_Eps | e6cbpA1 | A: beta barrels | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: ATP-synt_Eps | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B [auth A] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| B [auth A] | nAb DH270.6 b | SCFV-HEAVY-LAMBDA | Homo sapiens (human) | IGHV1-2*02, IGHJ1*01, IGHJ4*01, IGHJ5*01, IGHJ5*02, IGHJ4*02, IGHJ4*03, IGLV2-23*02, IGLJ2*01, IGLJ3*01 | V-DOMAIN VH, V-DOMAIN V-LAMBDA | IG | SCFV-HEAVY-LAMBDA | IMGT (202617-0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth P] | Man9-V3 glycopeptide | - |
| |
| B [auth A] | DH270.6 single chain variable fragment | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth P] | IPR000777 | Human immunodeficiency virus 1, envelope glycoprotein Gp120 | Domain |
| A [auth P] | IPR036377 | Gp120 core superfamily | Homologous Superfamily |














