6B6I
2.4A resolution structure of human Norovirus GII.4 protease
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Trypsin-like serine proteases | 8106439 | 3000114 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Trypsin-like serine proteases | 8106439 | 3000114 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Trypsin-like serine proteases | 8106439 | 3000114 | SCOP2B (2022-06-29) |
D | SCOP2 Family | Viral cysteine protease of trypsin fold, (3C/2A)Pro-like | 8084335 | 4007776 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Trypsin-like serine proteases | 8106439 | 3000114 | SCOP2 (2022-06-29) |
G | SCOP2B Superfamily | Trypsin-like serine proteases | 8106439 | 3000114 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Trypsin-like serine proteases | 8106439 | 3000114 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Trypsin-like serine proteases | 8106439 | 3000114 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Trypsin-like serine proteases | 8106439 | 3000114 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF05416 | e6b6iA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05416 | ECOD (1.6) |
B | PF05416 | e6b6iB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05416 | ECOD (1.6) |
C | PF05416 | e6b6iC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05416 | ECOD (1.6) |
D | PF05416 | e6b6iD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05416 | ECOD (1.6) |
G | PF05416 | e6b6iG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05416 | ECOD (1.6) |
H | PF05416 | e6b6iH1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05416 | ECOD (1.6) |
E | PF05416 | e6b6iE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05416 | ECOD (1.6) |
F | PF05416 | e6b6iF1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05416 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
B | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
C | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
D | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
G | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
H | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
E | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
F | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013614 | Viral polyprotein, Caliciviridae N-terminal | Domain | |
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR001205 | RNA-directed RNA polymerase, C-terminal domain | Domain | |
IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily | |
IPR001665 | Norovirus peptidase C37 | Domain | |
IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | Homologous Superfamily | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR014759 | Helicase, superfamily 3, single-stranded RNA virus | Domain | |
IPR043504 | Peptidase S1, PA clan, chymotrypsin-like fold | Homologous Superfamily | |
IPR007094 | RNA-directed RNA polymerase, catalytic domain | Domain | |
IPR000605 | Helicase, superfamily 3, single-stranded DNA/RNA virus | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |