Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth L]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052715 3002138 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyNucleic acid-binding proteins 8052717 3000135 SCOP2B (2022-06-29)
L [auth N]SCOP2B SuperfamilyHomeodomain-like 8052958 3000001 SCOP2B (2022-06-29)
L [auth N]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052959 3001284 SCOP2B (2022-06-29)
M [auth O]SCOP2B SuperfamilyTranslational machinery components 8098844 3000571 SCOP2B (2022-06-29)
N [auth V]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053139 3000068 SCOP2B (2022-06-29)
O [auth W]SCOP2B SuperfamilyRibosomal protein S8 8095469 3000709 SCOP2B (2022-06-29)
S [auth e]SCOP2B SuperfamilyRibosomal protein S30e-like 8053453 3002190 SCOP2B (2022-06-29)
V [auth d]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052572 3000068 SCOP2B (2022-06-29)
W [auth D]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8043545 3001043 SCOP2B (2022-06-29)
X [auth F]SCOP2B SuperfamilyRibosomal protein S7 8066003 3000799 SCOP2B (2022-06-29)
Y [auth K]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055714 3000034 SCOP2B (2022-06-29)
Z [auth M]SCOP2B SuperfamilyL30e-like 8063978 3001739 SCOP2B (2022-06-29)
BA [auth Q]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082685 3000100 SCOP2B (2022-06-29)
CA [auth S]SCOP2B SuperfamilyS13-like H2TH domain 8101555 3000053 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8052791 3001397 SCOP2B (2022-06-29)
DA [auth T]SCOP2B SuperfamilyWinged helix DNA-binding domain 8089318 3000034 SCOP2B (2022-06-29)
EA [auth U]SCOP2B SuperfamilyRibosomal protein S10 8098806 3001336 SCOP2B (2022-06-29)
FA [auth Z]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090992 3000034 SCOP2B (2022-06-29)
GA [auth c]SCOP2B SuperfamilyNucleic acid-binding proteins 8063426 3000135 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyRibosomal S3Ae-like 8053212 3002166 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyNucleic acid-binding proteins 8052756 3000135 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052757 3000334 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052755 3001473 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGS N-terminal domain-like 8053171 3000408 SCOP2B (2022-06-29)
ISCOP2B Superfamily50S Ribosomal protein L14-like 8053077 3000433 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
JS4e6zxdJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
K [auth L]Ribosomal_S17_1e6zxdL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
L [auth N]Ribosomal_S13_Ne6zxdN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
L [auth N]Ribosomal_S15_2e6zxdN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
M [auth O]Ribosomal_S11e6zxdO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
N [auth V]Ribosomal_S21ee6zxdV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
O [auth W]Ribosomal_S8_N_1e6zxdW1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
O [auth W]Ribosomal_S8_C_1e6zxdW2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
P [auth X]Ribosom_S12_S23e6zxdX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
Q [auth Y]Ribosomal_S24ee6zxdY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
R [auth b]Ribosomal_S27ee6zxdb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
S [auth e]Ribosomal_S30e6zxde1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
B [auth R]Ribosomal_S17ee6zxdR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
T [auth x]KH_1e6zxdx2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Eukaryotic type KH-domain (KH-domain type I)F: KH_1ECOD (1.6)
T [auth x]KOG3273e6zxdx1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Eukaryotic type KH-domain (KH-domain type I)F: KOG3273ECOD (1.6)
V [auth d]Ribosomal_S14_2e6zxdd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
W [auth D]Ribosomal_S3_Ce6zxdD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
W [auth D]KH_2_3e6zxdD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
X [auth F]Ribosomal_S7_1e6zxdF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
Y [auth K]S10_plectine6zxdK1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
Z [auth M]Ribosomal_L7Aee6zxdM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
AA [auth P]Ribosomal_S19e6zxdP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
BA [auth Q]Ribosomal_S9e6zxdQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
CA [auth S]Ribosomal_S13e6zxdS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
C [auth A]Ribosomal_S2_2e6zxdA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
DA [auth T]Ribosomal_S19ee6zxdT1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
EA [auth U]Ribosomal_S10_1e6zxdU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
FA [auth Z]Ribosomal_S25e6zxdZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
GA [auth c]Ribosomal_S28ee6zxdc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
HA [auth f]Ribosomal_S27e6zxdf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
IA [auth g]DUF1899e6zxdg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
D [auth B]Ribosomal_S3Ae_Ne6zxdB1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
D [auth B]Ribosomal_S3Ae_Ce6zxdB2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
E [auth C]Ribosomal_S5_C_1e6zxdC1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
E [auth C]Ribosomal_S5_3e6zxdC3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
E [auth C]Ribosomal_S5_2e6zxdC2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
F [auth E]Ribosomal_S4ee6zxdE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
F [auth E]40S_S4_Ce6zxdE1 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
F [auth E]RS4NTe6zxdE3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
GRibosomal_S6ee6zxdG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
HRibosomal_S7e_Ne6zxdH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
HRibosomal_S7e_C_1e6zxdH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
IRibosomal_S8ee6zxdI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
K [auth L]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
K [auth L]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
L [auth N]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
M [auth O]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
N [auth V]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
O [auth W]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
P [auth X]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
Q [auth Y]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
Q [auth Y]PF17146PIN domain of ribonuclease (PIN_6)PIN domain of ribonucleaseThis is a PIN domain found in eukaryotic ribonuclease Nob1 and archaeal ribonuclease VapC1 [1]. Budding yeast Nob1 is involved in proteasomal and 40S ribosomal subunit biogenesis [2]. VapC1 is a toxic component and a ribonuclease of a toxin-antitoxin ...This is a PIN domain found in eukaryotic ribonuclease Nob1 and archaeal ribonuclease VapC1 [1]. Budding yeast Nob1 is involved in proteasomal and 40S ribosomal subunit biogenesis [2]. VapC1 is a toxic component and a ribonuclease of a toxin-antitoxin (TA) module [3]. PIN domains are small protein domains identified by the presence of three strictly conserved acidic residues. Apart from these three residues, there is poor sequence conservation [4]. PIN domains are found in eukaryotes, eubacteria and archaea. In eukaryotes they are ribonucleases involved in nonsense mediated mRNA decay [5] and in processing of 18S ribosomal RNA [6]. In prokaryotes, they are the toxic components of toxin-antitoxin (TA) systems, their toxicity arising by virtue of their ribonuclease activity. The PIN domain TA systems are now called VapBC TAs(virulence associated proteins), where VapB is the inhibitor and VapC, the PIN-domain ribonuclease toxin [4].
Domain
W [auth D]PF07650KH domain (KH_2)KH domain- Domain
W [auth D]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
W [auth D]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
X [auth F]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
X [auth F]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
Y [auth K]PF13855Leucine rich repeat (LRR_8)Leucine rich repeat- Repeat
Y [auth K]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
Z [auth M]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
AA [auth P]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
BA [auth Q]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
CA [auth S]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
C [auth A]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
C [auth A]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
DA [auth T]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
EA [auth U]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
D [auth B]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
E [auth C]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
E [auth C]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
F [auth E]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
F [auth E]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
F [auth E]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
F [auth E]PF00467KOW motif (KOW)KOW motif- Family
PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2]pre-18S ribosomal RNA---
40S ribosomal protein S9
K [auth L]40S ribosomal protein S11
L [auth N]40S ribosomal protein S13
M [auth O]40S ribosomal protein S14
N [auth V]40S ribosomal protein S21
O [auth W]40S ribosomal protein S15a
P [auth X]40S ribosomal protein S23
Q [auth Y]40S ribosomal protein S24
R [auth b]40S ribosomal protein S27
S [auth e]40S ribosomal protein S30
B [auth R]40S ribosomal protein S17
T [auth x]RNA-binding protein PNO1
U [auth y]RNA-binding protein NOB1
V [auth d]40S ribosomal protein S29
W [auth D]40S ribosomal protein S3
X [auth F]40S ribosomal protein S5
Y [auth K]40S ribosomal protein S10
Z [auth M]40S ribosomal protein S12
AA [auth P]40S ribosomal protein S15
BA [auth Q]40S ribosomal protein S16
CA [auth S]40S ribosomal protein S18
C [auth A]40S ribosomal protein SA
DA [auth T]40S ribosomal protein S19
EA [auth U]40S ribosomal protein S20
FA [auth Z]40S ribosomal protein S25
GA [auth c]40S ribosomal protein S28
HA [auth f]Ubiquitin-40S ribosomal protein S27a
IA [auth g]Receptor of activated protein C kinase 1
JA [auth z]Serine/threonine-protein kinase RIO1
KA [auth k]Leucine-rich repeat-containing protein 47 -
D [auth B]40S ribosomal protein S3a
E [auth C]40S ribosomal protein S2
F [auth E]40S ribosomal protein S4, X isoform
40S ribosomal protein S6
40S ribosomal protein S7
40S ribosomal protein S8

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR002942RNA-binding S4 domainDomain
IPR022801Small ribosomal subunit protein uS4Family
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
K [auth L]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
K [auth L]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
K [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth L]IPR000266Small ribosomal subunit protein uS17Family
K [auth L]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
L [auth N]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
L [auth N]IPR000589Small ribosomal subunit protein uS15Family
L [auth N]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
L [auth N]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
M [auth O]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
M [auth O]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth O]IPR001971Small ribosomal subunit protein uS11Family
N [auth V]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
N [auth V]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
N [auth V]IPR001931Small ribosomal subunit protein eS21Family
O [auth W]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
O [auth W]IPR000630Small ribosomal subunit protein uS8Family
O [auth W]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
P [auth X]IPR006032Small ribosomal subunit protein uS12Family
P [auth X]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
P [auth X]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
Q [auth Y]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
Q [auth Y]IPR001976Small ribosomal subunit protein eS24Family
Q [auth Y]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Q [auth Y]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
R [auth b]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
R [auth b]IPR000592Small ribosomal subunit protein eS27Family
R [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
S [auth e]IPR019954Ubiquitin conserved siteConserved Site
S [auth e]IPR000626Ubiquitin-like domainDomain
S [auth e]IPR006846Small ribosomal subunit protein eS30Family
S [auth e]IPR039415Ubiquitin-like protein FUBIDomain
S [auth e]IPR019956Ubiquitin domainDomain
S [auth e]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
B [auth R]IPR001210Small ribosomal subunit protein eS17Family
B [auth R]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
B [auth R]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
T [auth x]IPR004087K Homology domainDomain
T [auth x]IPR036612K Homology domain, type 1 superfamilyHomologous Superfamily
U [auth y]IPR033411Ribonuclease, PIN domainDomain
U [auth y]IPR017117Ribonuclease Nob1, eukaryoteFamily
U [auth y]IPR039907RNA-binding protein NOB1Family
U [auth y]IPR036283NOB1 zinc finger-like superfamilyHomologous Superfamily
U [auth y]IPR014881Nin one binding (NOB1) Zn-ribbon-likeDomain
U [auth y]IPR033461Putative WW-binding domain and destruction boxDomain
U [auth y]IPR002716PIN domainDomain
V [auth d]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
V [auth d]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
V [auth d]IPR001209Small ribosomal subunit protein uS14Family
V [auth d]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
W [auth D]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
W [auth D]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
W [auth D]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
W [auth D]IPR004044K Homology domain, type 2Domain
W [auth D]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
W [auth D]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
W [auth D]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
X [auth F]IPR023798Small ribosomal subunit protein uS7 domainDomain
X [auth F]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
X [auth F]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
X [auth F]IPR000235Small ribosomal subunit protein uS7Family
X [auth F]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
Y [auth K]IPR037447Small ribosomal subunit protein eS10Family
Y [auth K]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
Y [auth K]IPR005326Plectin/eS10, N-terminalDomain
Z [auth M]IPR000530Small ribosomal subunit protein eS12Family
Z [auth M]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
Z [auth M]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
Z [auth M]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
AA [auth P]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AA [auth P]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
AA [auth P]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
AA [auth P]IPR002222Small ribosomal subunit protein uS19Family
BA [auth Q]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
BA [auth Q]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
BA [auth Q]IPR000754Small ribosomal subunit protein uS9Family
BA [auth Q]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CA [auth S]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
CA [auth S]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
CA [auth S]IPR001892Small ribosomal subunit protein uS13Family
CA [auth S]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
C [auth A]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
C [auth A]IPR001865Small ribosomal subunit protein uS2Family
C [auth A]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
C [auth A]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
C [auth A]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
C [auth A]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
C [auth A]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
DA [auth T]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
DA [auth T]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
DA [auth T]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
DA [auth T]IPR001266Small ribosomal subunit protein eS19Family
EA [auth U]IPR027486Small ribosomal subunit protein uS10 domainDomain
EA [auth U]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
EA [auth U]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
EA [auth U]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
EA [auth U]IPR001848Small ribosomal subunit protein uS10Family
FA [auth Z]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
FA [auth Z]IPR004977Small ribosomal subunit protein eS25Family
GA [auth c]IPR028626Ribosomal protein eS28 conserved siteConserved Site
GA [auth c]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
GA [auth c]IPR000289Small ribosomal subunit protein eS28Family
HA [auth f]IPR019954Ubiquitin conserved siteConserved Site
HA [auth f]IPR050158Ubiquitin and ubiquitin-likeFamily
HA [auth f]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth f]IPR000626Ubiquitin-like domainDomain
HA [auth f]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
HA [auth f]IPR002906Small ribosomal subunit protein eS31Domain
HA [auth f]IPR019956Ubiquitin domainDomain
HA [auth f]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
IA [auth g]IPR019775WD40 repeat, conserved siteConserved Site
IA [auth g]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IA [auth g]IPR045223Small ribosomal subunit protein RACK1-likeFamily
IA [auth g]IPR020472G-protein beta WD-40 repeatRepeat
IA [auth g]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IA [auth g]IPR001680WD40 repeatRepeat
JA [auth z]IPR018935RIO kinase, conserved siteConserved Site
JA [auth z]IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
JA [auth z]IPR051272RIO-type Ser/Thr kinaseFamily
JA [auth z]IPR017407Serine/threonine-protein kinase Rio1Family
JA [auth z]IPR000687RIO kinaseDomain
KA [auth k]IPR005146B3/B4 tRNA-binding domainDomain
KA [auth k]IPR025875Leucine rich repeat 4Repeat
KA [auth k]IPR045060Phenylalanine-tRNA ligase, class IIc, beta subunitFamily
KA [auth k]IPR020825Phenylalanyl-tRNA synthetase-like, B3/B4Homologous Superfamily
KA [auth k]IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
KA [auth k]IPR001611Leucine-rich repeatRepeat
KA [auth k]IPR003591Leucine-rich repeat, typical subtypeRepeat
D [auth B]IPR001593Small ribosomal subunit protein eS1Family
D [auth B]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
D [auth B]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
E [auth C]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth C]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth C]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
E [auth C]IPR000851Small ribosomal subunit protein uS5Family
E [auth C]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
E [auth C]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth C]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
F [auth E]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
F [auth E]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
F [auth E]IPR013845Small ribosomal subunit protein eS4, central regionDomain
F [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth E]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
F [auth E]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
F [auth E]IPR002942RNA-binding S4 domainDomain
F [auth E]IPR000876Small ribosomal subunit protein eS4Family
F [auth E]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
F [auth E]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
F [auth E]IPR005824KOWDomain
IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
IPR001377Small ribosomal subunit protein eS6Family
IPR014401Small ribosomal subunit protein eS6-likeFamily
IPR000554Small ribosomal subunit protein eS7Family
IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
IPR001047Small ribosomal subunit protein eS8Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP46781
K [auth L]PharosP62280
L [auth N]PharosP62277
M [auth O]PharosP62263
N [auth V]PharosP63220
O [auth W]PharosP62244
P [auth X]PharosP62266
Q [auth Y]PharosP62847
R [auth b]PharosP42677
S [auth e]PharosP62861
B [auth R]PharosP08708
T [auth x]PharosQ9NRX1
U [auth y]PharosQ9ULX3
V [auth d]PharosP62273
W [auth D]PharosP23396
X [auth F]PharosP46782
Y [auth K]PharosP46783
Z [auth M]PharosP25398
AA [auth P]PharosP62841
BA [auth Q]PharosP62249
CA [auth S]PharosP62269
C [auth A]PharosP08865
DA [auth T]PharosP39019
EA [auth U]PharosP60866
FA [auth Z]PharosP62851
GA [auth c]PharosP62857
HA [auth f]PharosP62979
IA [auth g]PharosP63244
JA [auth z]PharosQ9BRS2
KA [auth k]PharosQ8N1G4
E [auth C]PharosP15880
F [auth E]PharosP62701
PharosP62753
PharosP62081
PharosP62241