6ZW4 | pdb_00006zw4

C14 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Trypsin	e6zw4A1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
AA [auth BA]	MIF4G	e6zw4BA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
AB [auth BB]	MIF4G	e6zw4BB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
AC [auth BC]	Trypsin	e6zw4BC1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
B	MIF4G	e6zw4B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
BA [auth CA]	MIF4G	e6zw4CA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
BB [auth CB]	Glyco_transf_41	e6zw4CB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
BC [auth CC]	MIF4G	e6zw4CC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
C	MIF4G	e6zw4C1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
CA [auth DA]	MIF4G	e6zw4DA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
CB [auth DB]	Trypsin	e6zw4DB1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
CC [auth DC]	MIF4G	e6zw4DC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
D	MIF4G	e6zw4D1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
DA [auth EA]	Glyco_transf_41	e6zw4EA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
DB [auth EB]	MIF4G	e6zw4EB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
DC [auth EC]	MIF4G	e6zw4EC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
E	MIF4G	e6zw4E1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
EA [auth FA]	Trypsin	e6zw4FA1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
EB [auth FB]	MIF4G	e6zw4FB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
EC [auth FC]	MIF4G	e6zw4FC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
F	Glyco_transf_41	e6zw4F1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
FA [auth GA]	MIF4G	e6zw4GA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
FB [auth GB]	MIF4G	e6zw4GB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
FC [auth GC]	Glyco_transf_41	e6zw4GC1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
G	Trypsin	e6zw4G1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
GA [auth HA]	MIF4G	e6zw4HA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
GB [auth HB]	MIF4G	e6zw4HB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
H	MIF4G	e6zw4H1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
HA [auth IA]	MIF4G	e6zw4IA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
HB [auth IB]	Glyco_transf_41	e6zw4IB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
I	MIF4G	e6zw4I1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
IA [auth JA]	MIF4G	e6zw4JA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
IB [auth JB]	Trypsin	e6zw4JB1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
J	MIF4G	e6zw4J1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
JA [auth KA]	Glyco_transf_41	e6zw4KA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
JB [auth KB]	MIF4G	e6zw4KB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
K	MIF4G	e6zw4K1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
KA [auth LA]	Trypsin	e6zw4LA1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
KB [auth LB]	MIF4G	e6zw4LB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
L	Glyco_transf_41	e6zw4L1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
LA [auth MA]	MIF4G	e6zw4MA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
LB [auth MB]	MIF4G	e6zw4MB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
M	Trypsin	e6zw4M1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
MA [auth NA]	MIF4G	e6zw4NA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
MB [auth NB]	MIF4G	e6zw4NB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
NA [auth OA]	MIF4G	e6zw4OA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
NB [auth OB]	Glyco_transf_41	e6zw4OB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
O	MIF4G	e6zw4O1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
OA [auth PA]	MIF4G	e6zw4PA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
OB [auth PB]	Trypsin	e6zw4PB1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
P	MIF4G	e6zw4P1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
PA [auth QA]	Glyco_transf_41	e6zw4QA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
PB [auth QB]	MIF4G	e6zw4QB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
Q	MIF4G	e6zw4Q1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
QA [auth RA]	Trypsin	e6zw4RA1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
QB [auth RB]	MIF4G	e6zw4RB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
R	Glyco_transf_41	e6zw4R1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
RA [auth SA]	MIF4G	e6zw4SA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
RB [auth SB]	MIF4G	e6zw4SB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
S	Trypsin	e6zw4S1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
SA [auth TA]	MIF4G	e6zw4TA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
SB [auth TB]	MIF4G	e6zw4TB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
T	MIF4G	e6zw4T1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
TA [auth UA]	MIF4G	e6zw4UA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
TB [auth UB]	Glyco_transf_41	e6zw4UB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
U [auth V]	MIF4G	e6zw4V1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
UA [auth VA]	MIF4G	e6zw4VA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
UB [auth VB]	Trypsin	e6zw4VB1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
V [auth W]	MIF4G	e6zw4W1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
VA [auth WA]	Glyco_transf_41	e6zw4WA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
VB [auth WB]	MIF4G	e6zw4WB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
W [auth X]	MIF4G	e6zw4X1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
WB [auth XB]	MIF4G	e6zw4XB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
X [auth Y]	Glyco_transf_41	e6zw4Y1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
XA [auth YA]	MIF4G	e6zw4YA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
XB [auth YB]	MIF4G	e6zw4YB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
Y [auth Z]	Trypsin	e6zw4Z1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
YA [auth ZA]	MIF4G	e6zw4ZA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
YB [auth ZB]	MIF4G	e6zw4ZB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
Z [auth AA]	MIF4G	e6zw4AA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
ZA [auth AB]	MIF4G	e6zw4AB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
ZB [auth AC]	Glyco_transf_41	e6zw4AC1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
WA [auth XA]	Trypsin	e6zw4XA1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Trypsin	ECOD (v294.2)
N	MIF4G	e6zw4N1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth BA], AB [auth BB], AC [auth BC], B, A, AA [auth BA], AB [auth BB], AC [auth BC], B, BA [auth CA], BB [auth CB], BC [auth CC], C, CA [auth DA], CB [auth DB], CC [auth DC], D, DA [auth EA], DB [auth EB], DC [auth EC], E, EA [auth FA], EB [auth FB], EC [auth FC], F, FA [auth GA], FB [auth GB], FC [auth GC], G, GA [auth HA], GB [auth HB], H, HA [auth IA], HB [auth IB], I, IA [auth JA], IB [auth JB], J, JA [auth KA], JB [auth KB], K, KA [auth LA], KB [auth LB], L, LA [auth MA], LB [auth MB], M, MA [auth NA], MB [auth NB], N, NA [auth OA], NB [auth OB], O, OA [auth PA], OB [auth PB], P, PA [auth QA], PB [auth QB], Q, QA [auth RA], QB [auth RB], R, RA [auth SA], RB [auth SB], S, SA [auth TA], SB [auth TB], T, TA [auth UA], TB [auth UB], U [auth V], UA [auth VA], UB [auth VB], V [auth W], VA [auth WA], VB [auth WB], W [auth X], WA [auth XA], WB [auth XB], X [auth Y], XA [auth YA], XB [auth YB], Y [auth Z], YA [auth ZA], YB [auth ZB], Z [auth AA], ZA [auth AB], ZB [auth AC]	PF04012	PspA/IM30 family (PspA_IM30)	PspA/IM30 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth BA], AB [auth BB], AC [auth BC], B, A, AA [auth BA], AB [auth BB], AC [auth BC], B, BA [auth CA], BB [auth CB], BC [auth CC], C, CA [auth DA], CB [auth DB], CC [auth DC], D, DA [auth EA], DB [auth EB], DC [auth EC], E, EA [auth FA], EB [auth FB], EC [auth FC], F, FA [auth GA], FB [auth GB], FC [auth GC], G, GA [auth HA], GB [auth HB], H, HA [auth IA], HB [auth IB], I, IA [auth JA], IB [auth JB], J, JA [auth KA], JB [auth KB], K, KA [auth LA], KB [auth LB], L, LA [auth MA], LB [auth MB], M, MA [auth NA], MB [auth NB], N, NA [auth OA], NB [auth OB], O, OA [auth PA], OB [auth PB], P, PA [auth QA], PB [auth QB], Q, QA [auth RA], QB [auth RB], R, RA [auth SA], RB [auth SB], S, SA [auth TA], SB [auth TB], T, TA [auth UA], TB [auth UB], U [auth V], UA [auth VA], UB [auth VB], V [auth W], VA [auth WA], VB [auth WB], W [auth X], WA [auth XA], WB [auth XB], X [auth Y], XA [auth YA], XB [auth YB], Y [auth Z], YA [auth ZA], YB [auth ZB], Z [auth AA], ZA [auth AB], ZB [auth AC]	vipp1	binding lipid binding	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth BA], AB [auth BB], AC [auth BC], B, A, AA [auth BA], AB [auth BB], AC [auth BC], B, BA [auth CA], BB [auth CB], BC [auth CC], C, CA [auth DA], CB [auth DB], CC [auth DC], D, DA [auth EA], DB [auth EB], DC [auth EC], E, EA [auth FA], EB [auth FB], EC [auth FC], F, FA [auth GA], FB [auth GB], FC [auth GC], G, GA [auth HA], GB [auth HB], H, HA [auth IA], HB [auth IB], I, IA [auth JA], IB [auth JB], J, JA [auth KA], JB [auth KB], K, KA [auth LA], KB [auth LB], L, LA [auth MA], LB [auth MB], M, MA [auth NA], MB [auth NB], N, NA [auth OA], NB [auth OB], O, OA [auth PA], OB [auth PB], P, PA [auth QA], PB [auth QB], Q, QA [auth RA], QB [auth RB], R, RA [auth SA], RB [auth SB], S, SA [auth TA], SB [auth TB], T, TA [auth UA], TB [auth UB], U [auth V], UA [auth VA], UB [auth VB], V [auth W], VA [auth WA], VB [auth WB], W [auth X], WA [auth XA], WB [auth XB], X [auth Y], XA [auth YA], XB [auth YB], Y [auth Z], YA [auth ZA], YB [auth ZB], Z [auth AA], ZA [auth AB], ZB [auth AC]	IPR007157	PspA/VIPP1	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.