6ZPO
bovine ATP synthase monomer state 1 (combined)
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: mpstruc
- Protein Modification Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
K [auth J] | SCOP2B Superfamily | F1 ATPase inhibitor, IF1, C-terminal domain | 8037355 | 3001557 | SCOP2B (2022-06-29) |
V [auth b] | SCOP2B Superfamily | ATP synthase B chain-like | 8032773 | 3001636 | SCOP2B (2022-06-29) |
W [auth d] | SCOP2B Superfamily | ATP synthase D chain-like | 8032774 | 3001647 | SCOP2B (2022-06-29) |
AA [auth h] | SCOP2B Superfamily | Mitochondrial ATP synthase coupling factor 6 | 8039041 | 3001984 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018243 | 3002019 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056868 | 3000684 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018248 | 3001034 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018243 | 3002019 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018248 | 3001034 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056868 | 3000684 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018248 | 3001034 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056868 | 3000684 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018243 | 3002019 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018253 | 3002019 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056904 | 3000684 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018258 | 3001034 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018253 | 3002019 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018258 | 3001034 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056904 | 3000684 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018253 | 3002019 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056904 | 3000684 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018258 | 3001034 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | ATP synthase gamma subunit-like | 8044412 | 3000451 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 8037352 | 3000182 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase C-terminal domain | 8037350 | 3000785 | SCOP2B (2022-06-29) |
J [auth I] | SCOP2B Superfamily | epsilon subunit of mitochondrial F1F0-ATP synthase | 8037353 | 3001799 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
U [auth a] | PF00119 | e6zpoa1 | A: alpha bundles | X: F1F0 ATP synthase subunit A (From Topology) | H: F1F0 ATP synthase subunit A (From Topology) | T: F1F0 ATP synthase subunit A | F: PF00119 | ECOD (1.6) |
V [auth b] | PF05405 | e6zpob1 | A: extended segments | X: F-type ATP synthase subunit b (From Topology) | H: F-type ATP synthase subunit b (From Topology) | T: F-type ATP synthase subunit b | F: PF05405 | ECOD (1.6) |
W [auth d] | PF05873 | e6zpod1 | A: extended segments | X: ATP synthase D chain-like (From Topology) | H: ATP synthase D chain-like (From Topology) | T: ATP synthase D chain-like | F: PF05873 | ECOD (1.6) |
AA [auth h] | PF05511 | e6zpoh1 | A: extended segments | X: Mitochondrial ATP synthase coupling factor 6 (From Topology) | H: Mitochondrial ATP synthase coupling factor 6 (From Topology) | T: Mitochondrial ATP synthase coupling factor 6 | F: PF05511 | ECOD (1.6) |
B [auth A] | PF02874 | e6zpoA3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
B [auth A] | PF00306 | e6zpoA2 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF00306 | ECOD (1.6) |
B [auth A] | PF00006 | e6zpoA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006 | ECOD (1.6) |
C [auth B] | PF02874 | e6zpoB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
C [auth B] | PF00306 | e6zpoB3 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF00306 | ECOD (1.6) |
C [auth B] | PF00006 | e6zpoB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006 | ECOD (1.6) |
D [auth C] | PF02874 | e6zpoC3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
D [auth C] | PF00306 | e6zpoC1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF00306 | ECOD (1.6) |
D [auth C] | PF00006 | e6zpoC2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006 | ECOD (1.6) |
E [auth D] | PF02874 | e6zpoD2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
E [auth D] | PF22919 | e6zpoD1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF22919 | ECOD (1.6) |
E [auth D] | PF00006 | e6zpoD3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006 | ECOD (1.6) |
F [auth E] | PF02874 | e6zpoE2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
F [auth E] | PF22919 | e6zpoE3 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF22919 | ECOD (1.6) |
F [auth E] | PF00006 | e6zpoE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006 | ECOD (1.6) |
G [auth F] | PF02874 | e6zpoF3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF02874 | ECOD (1.6) |
G [auth F] | PF22919 | e6zpoF2 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: PF22919 | ECOD (1.6) |
G [auth F] | PF00006 | e6zpoF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00006 | ECOD (1.6) |
H [auth G] | PF00231 | e6zpoG1 | A: a/b three-layered sandwiches | X: ATP synthase (F1-ATPase), gamma subunit (From Topology) | H: ATP synthase (F1-ATPase), gamma subunit (From Topology) | T: ATP synthase (F1-ATPase), gamma subunit | F: PF00231 | ECOD (1.6) |
I [auth H] | PF02823 | e6zpoH1 | A: beta sandwiches | X: Epsilon subunit of F1F0-ATP synthase-N | H: Epsilon subunit of F1F0-ATP synthase-N (From Topology) | T: Epsilon subunit of F1F0-ATP synthase-N | F: PF02823 | ECOD (1.6) |
I [auth H] | PF21335 | e6zpoH2 | A: alpha bundles | X: Long alpha-hairpin | H: Epsilon subunit of F1F0-ATP synthase C-terminal domain (From Topology) | T: Epsilon subunit of F1F0-ATP synthase C-terminal domain | F: PF21335 | ECOD (1.6) |
J [auth I] | PF04627 | e6zpoI1 | A: extended segments | X: Epsilon subunit of mitochondrial F1F0-ATP synthase (From Topology) | H: Epsilon subunit of mitochondrial F1F0-ATP synthase (From Topology) | T: Epsilon subunit of mitochondrial F1F0-ATP synthase | F: PF04627 | ECOD (1.6) |
L [auth K] | PF00137 | e6zpoK1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
M [auth L] | PF00137 | e6zpoL1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
N [auth M] | PF00137 | e6zpoM1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
O [auth N] | PF00137 | e6zpoN1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
P [auth O] | PF00137 | e6zpoO1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
Q [auth P] | PF00137 | e6zpoP1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
R [auth Q] | PF00137 | e6zpoQ1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
S [auth R] | PF00137 | e6zpoR1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: PF00137 | ECOD (1.6) |
T [auth S] | PF00213 | e6zpoS1 | A: alpha bundles | X: ATPD N-terminal domain-like | H: N-terminal domain of the delta subunit of the F1F0-ATP synthase (From Topology) | T: N-terminal domain of the delta subunit of the F1F0-ATP synthase | F: PF00213 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth 8] | PF00895 | ATP synthase protein 8 (ATP-synt_8) | ATP synthase protein 8 | - | Family |
B [auth A], C [auth B], D [auth C] | PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain |
B [auth A], C [auth B], D [auth C] | PF00119 | ATP synthase A chain (ATP-synt_A) | ATP synthase A chain | - | Domain |
B [auth A], C [auth B], D [auth C] | PF00306 | ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C) | ATP synthase alpha/beta chain, C terminal domain | - | Domain |
B [auth A], C [auth B], D [auth C] | PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
B [auth A], C [auth B], D [auth C] | PF05405 | Mitochondrial ATP synthase B chain precursor (ATP-synt_B) (Mt_ATP-synt_B) | Mitochondrial ATP synthase B chain precursor (ATP-synt_B) | - | Family |
E [auth D], F [auth E], G [auth F] | PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain |
E [auth D], F [auth E], G [auth F] | PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain |
E [auth D], F [auth E], G [auth F] | PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
H [auth G] | PF00231 | ATP synthase (ATP-synt) | ATP synthase | - | Domain |
I [auth H] | PF02823 | ATP synthase, Delta/Epsilon chain, beta-sandwich domain (ATP-synt_DE_N) | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensit ... | Domain |
I [auth H] | PF21335 | Metazoan delta subunit of F1F0-ATP synthase, C-terminal domain (ATPD_C_metazoa) | Metazoan delta subunit of F1F0-ATP synthase, C-terminal domain | F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core, and F0 which contains the membrane proton channel. This entry includes ATP synthase subunit delta from animals (called epsilon in bacteria or chlorop ... | Domain |
J [auth I] | PF04627 | Mitochondrial ATP synthase epsilon chain (ATP-synt_Eps) | Mitochondrial ATP synthase epsilon chain | - | Family |
PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain | |
T [auth S] | PF00213 | ATP synthase delta (OSCP) subunit (OSCP) | ATP synthase delta (OSCP) subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Proton or Sodium translocating F-type, V-type and A-type ATPases | V-type and F-type ATPases |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | F-type ATPase | F1Fo ATP synthase, F1-peripheral stalk domain, state 1 |