Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
P [auth g]d6zolg_ All beta proteins 7-bladed beta-propeller WD40 repeat-like WD40-repeat Guanine nucleotide-binding protein subunit beta-2-like 1 (GNB2L1 or RACK1) (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth D]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II)8043545 3001043 SCOP2B (2022-06-29)
C [auth F]SCOP2B SuperfamilyRibosomal protein S78066003 3000799 SCOP2B (2022-06-29)
D [auth K]SCOP2B SuperfamilyWinged helix DNA-binding domain8055714 3000034 SCOP2B (2022-06-29)
G [auth Q]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082685 3000100 SCOP2B (2022-06-29)
I [auth S]SCOP2B SuperfamilyS13-like H2TH domain8101555 3000053 SCOP2B (2022-06-29)
J [auth T]SCOP2B SuperfamilyWinged helix DNA-binding domain8089318 3000034 SCOP2B (2022-06-29)
K [auth U]SCOP2B SuperfamilyRibosomal protein S108098806 3001336 SCOP2B (2022-06-29)
L [auth Z]SCOP2B SuperfamilyWinged helix DNA-binding domain8090992 3000034 SCOP2B (2022-06-29)
M [auth c]SCOP2B SuperfamilyNucleic acid-binding proteins8063426 3000135 SCOP2B (2022-06-29)
N [auth d]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052572 3000068 SCOP2B (2022-06-29)
E [auth M]SCOP2B SuperfamilyL30e-like8063978 3001739 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth D]PF00189e6zolD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
B [auth D]PF07650e6zolD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
C [auth F]PF00177e6zolF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
D [auth K]PF03501e6zolK1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
F [auth P]PF00203e6zolP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
G [auth Q]PF00380e6zolQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
H [auth R]PF00833e6zolR1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
I [auth S]PF00416e6zolS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
J [auth T]PF01090e6zolT1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
K [auth U]PF00338e6zolU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
L [auth Z]PF03297e6zolZ1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
M [auth c]PF01200e6zolc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
N [auth d]PF00253e6zold1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
O [auth f]PF01599e6zolf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
P [auth g]PF00400e6zolg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
E [auth M]PF01248e6zolM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth D]PF07650KH domain (KH_2)KH domain- Domain
B [auth D]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
C [auth F]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
D [auth K]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
F [auth P]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
G [auth Q]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
H [auth R]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
I [auth S]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
J [auth T]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
K [auth U]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
L [auth Z]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
M [auth c]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
N [auth d]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
O [auth f]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
P [auth g]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
E [auth M]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2]18S ribosomal RNA---
B [auth D]40S ribosomal protein S3
C [auth F]40S ribosomal protein S5
D [auth K]40S ribosomal protein S10
F [auth P]40S ribosomal protein S15
G [auth Q]40S ribosomal protein S16
H [auth R]40S ribosomal protein S17
I [auth S]40S ribosomal protein S18
J [auth T]40S ribosomal protein S19
K [auth U]40S ribosomal protein S20
L [auth Z]40S ribosomal protein S25
M [auth c]40S ribosomal protein S28
N [auth d]40S ribosomal protein S29
O [auth f]Ribosomal protein S27a
P [auth g]Receptor of activated protein C kinase 1
E [auth M]40S ribosomal protein S12

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth D]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
B [auth D]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
B [auth D]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
B [auth D]IPR004044K Homology domain, type 2Domain
B [auth D]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
B [auth D]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
B [auth D]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
C [auth F]IPR023798Small ribosomal subunit protein uS7 domainDomain
C [auth F]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
C [auth F]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
C [auth F]IPR000235Small ribosomal subunit protein uS7Family
C [auth F]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
D [auth K]IPR037447Small ribosomal subunit protein eS10Family
D [auth K]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
D [auth K]IPR005326Plectin/eS10, N-terminalDomain
F [auth P]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
F [auth P]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
F [auth P]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
F [auth P]IPR002222Small ribosomal subunit protein uS19Family
G [auth Q]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
G [auth Q]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
G [auth Q]IPR000754Small ribosomal subunit protein uS9Family
G [auth Q]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
H [auth R]IPR001210Small ribosomal subunit protein eS17Family
H [auth R]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
H [auth R]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
I [auth S]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
I [auth S]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
I [auth S]IPR001892Small ribosomal subunit protein uS13Family
I [auth S]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
J [auth T]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
J [auth T]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
J [auth T]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
J [auth T]IPR001266Small ribosomal subunit protein eS19Family
K [auth U]IPR027486Small ribosomal subunit protein uS10 domainDomain
K [auth U]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
K [auth U]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
K [auth U]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
K [auth U]IPR001848Small ribosomal subunit protein uS10Family
L [auth Z]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
L [auth Z]IPR004977Small ribosomal subunit protein eS25Family
M [auth c]IPR028626Ribosomal protein eS28 conserved siteConserved Site
M [auth c]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth c]IPR000289Small ribosomal subunit protein eS28Family
N [auth d]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
N [auth d]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
N [auth d]IPR001209Small ribosomal subunit protein uS14Family
N [auth d]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
O [auth f]IPR019954Ubiquitin conserved siteConserved Site
O [auth f]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
O [auth f]IPR000626Ubiquitin-like domainDomain
O [auth f]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
O [auth f]IPR002906Small ribosomal subunit protein eS31Domain
O [auth f]IPR019956Ubiquitin domainDomain
O [auth f]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
P [auth g]IPR019775WD40 repeat, conserved siteConserved Site
P [auth g]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
P [auth g]IPR045223Small ribosomal subunit protein RACK1-likeFamily
P [auth g]IPR020472G-protein beta WD-40 repeatRepeat
P [auth g]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
P [auth g]IPR001680WD40 repeatRepeat
E [auth M]IPR000530Small ribosomal subunit protein eS12Family
E [auth M]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
E [auth M]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
E [auth M]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth D]PharosP23396
C [auth F]PharosP46782
D [auth K]PharosP46783
F [auth P]PharosP62841
G [auth Q]PharosP62249
H [auth R]PharosP08708
I [auth S]PharosP62269
J [auth T]PharosP39019
K [auth U]PharosP60866
L [auth Z]PharosP62851
M [auth c]PharosP62857
N [auth d]PharosP62273
O [auth f]PharosP62979
P [auth g]PharosP63244
E [auth M]PharosP25398