Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth B]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8052791 3001397 SCOP2B (2022-06-29)
B [auth C]SCOP2B SuperfamilyRibosomal S3Ae-like8053212 3002166 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyAlpha-L RNA-binding motif8052755 3001473 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyNucleic acid-binding proteins8052756 3000135 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052757 3000334 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II)8043545 3001043 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyGS N-terminal domain-like8053171 3000408 SCOP2B (2022-06-29)
H [auth I]SCOP2B Superfamily50S Ribosomal protein L14-like8053077 3000433 SCOP2B (2022-06-29)
J [auth K]SCOP2B SuperfamilyRibosomal protein S78066003 3000799 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052715 3002138 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyNucleic acid-binding proteins8052717 3000135 SCOP2B (2022-06-29)
L [auth M]SCOP2B SuperfamilyWinged helix DNA-binding domain8055714 3000034 SCOP2B (2022-06-29)
M [auth N]SCOP2B SuperfamilyHomeodomain-like8052958 3000001 SCOP2B (2022-06-29)
M [auth N]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052959 3001284 SCOP2B (2022-06-29)
N [auth O]SCOP2B SuperfamilyL30e-like8063978 3001739 SCOP2B (2022-06-29)
O [auth P]SCOP2B SuperfamilyTranslational machinery components8098844 3000571 SCOP2B (2022-06-29)
S [auth T]SCOP2B SuperfamilyS13-like H2TH domain8101555 3000053 SCOP2B (2022-06-29)
T [auth U]SCOP2B SuperfamilyWinged helix DNA-binding domain8089318 3000034 SCOP2B (2022-06-29)
U [auth V]SCOP2B SuperfamilyRibosomal protein S108098806 3001336 SCOP2B (2022-06-29)
V [auth W]SCOP2B SuperfamilyRibosomal protein S88095469 3000709 SCOP2B (2022-06-29)
Y [auth Z]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053139 3000068 SCOP2B (2022-06-29)
BA [auth c]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053143 3000068 SCOP2B (2022-06-29)
CA [auth d]SCOP2B SuperfamilyNucleic acid-binding proteins8063426 3000135 SCOP2B (2022-06-29)
DA [auth e]SCOP2B SuperfamilyRibosomal protein S30e-like8053453 3002190 SCOP2B (2022-06-29)
EA [auth f]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052572 3000068 SCOP2B (2022-06-29)
Q [auth R]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082685 3000100 SCOP2B (2022-06-29)
Z [auth a]SCOP2B SuperfamilyWinged helix DNA-binding domain8090992 3000034 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]Ribosomal_S2_2e6zn5B1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
B [auth C]Ribosomal_S3Ae_Ne6zn5C2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
B [auth C]Ribosomal_S3Ae_Ce6zn5C1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
C [auth D]Ribosomal_S5_C_1e6zn5D1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
C [auth D]Ribosomal_S5_3e6zn5D3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
C [auth D]Ribosomal_S5_2e6zn5D2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
D [auth E]Ribosomal_S4ee6zn5E2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
D [auth E]40S_S4_Ce6zn5E1 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
D [auth E]RS4NTe6zn5E3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
E [auth F]Ribosomal_S3_Ce6zn5F2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
E [auth F]KH_2_3e6zn5F1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
F [auth G]Ribosomal_S6ee6zn5G1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
G [auth H]Ribosomal_S7e_Ne6zn5H2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
G [auth H]Ribosomal_S7e_C_1e6zn5H1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
H [auth I]Ribosomal_S8ee6zn5I1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
I [auth J]S4e6zn5J1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
J [auth K]Ribosomal_S7_1e6zn5K1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
K [auth L]Ribosomal_S17_1e6zn5L1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
L [auth M]S10_plectine6zn5M1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
M [auth N]Ribosomal_S13_Ne6zn5N2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
M [auth N]Ribosomal_S15_2e6zn5N1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
N [auth O]Ribosomal_L7Aee6zn5O1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
O [auth P]Ribosomal_S11e6zn5P1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
P [auth Q]Ribosomal_S19e6zn5Q1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
R [auth S]Ribosomal_S17ee6zn5S1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
S [auth T]Ribosomal_S13e6zn5T1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
T [auth U]Ribosomal_S19ee6zn5U1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
U [auth V]Ribosomal_S10_1e6zn5V1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
V [auth W]Ribosomal_S8_N_1e6zn5W1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
V [auth W]Ribosomal_S8_C_1e6zn5W2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
W [auth X]Ribosom_S12_S23e6zn5X1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
X [auth Y]Ribosomal_S24ee6zn5Y1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
Y [auth Z]Ribosomal_S21ee6zn5Z1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
AA [auth b]Ribosomal_S27ee6zn5b1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
BA [auth c]Ribosomal_S26ee6zn5c1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
CA [auth d]Ribosomal_S28ee6zn5d1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
DA [auth e]Ribosomal_S30e6zn5e1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
EA [auth f]Ribosomal_S14_2e6zn5f1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
FA [auth g]Ribosomal_S27e6zn5g1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
GA [auth j]DUF1899e6zn5j1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
Q [auth R]Ribosomal_S9e6zn5R1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
Z [auth a]Ribosomal_S25e6zn5a1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
A [auth B]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
B [auth C]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
C [auth D]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
C [auth D]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
D [auth E]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
D [auth E]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
D [auth E]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
D [auth E]PF00467KOW motif (KOW)KOW motif- Family
E [auth F]PF07650KH domain (KH_2)KH domain- Domain
E [auth F]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
F [auth G]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
G [auth H]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
H [auth I]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
I [auth J]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
I [auth J]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
J [auth K]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
K [auth L]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
K [auth L]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
L [auth M]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
M [auth N]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
M [auth N]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
N [auth O]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
O [auth P]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
P [auth Q]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
R [auth S]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
S [auth T]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
T [auth U]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
U [auth V]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
V [auth W]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
W [auth X]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
X [auth Y]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
Y [auth Z]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
AA [auth b]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
BA [auth c]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
CA [auth d]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
DA [auth e]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
EA [auth f]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
FA [auth g]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
GA [auth j]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
JA [auth u]PF08142AARP2CN (NUC121) domain (AARP2CN)AARP2CN (NUC121) domainThis domain is the central domain of AARP2. It is weakly similar to the GTP-binding domain of elongation factor TU [1].Domain
JA [auth u]PF0495040S ribosome biogenesis protein Tsr1 and BMS1 C-terminal (RIBIOP_C)40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal- Family
Q [auth R]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
Z [auth a]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B]40S ribosomal protein SA
B [auth C]40S ribosomal protein S3a
C [auth D]40S ribosomal protein S2
D [auth E]40S ribosomal protein S4, X isoform
E [auth F]40S ribosomal protein S3
F [auth G]40S ribosomal protein S6
G [auth H]40S ribosomal protein S7
H [auth I]40S ribosomal protein S8
I [auth J]40S ribosomal protein S9
J [auth K]40S ribosomal protein S5
K [auth L]40S ribosomal protein S11
L [auth M]40S ribosomal protein S10
M [auth N]40S ribosomal protein S13
N [auth O]40S ribosomal protein S12
O [auth P]40S ribosomal protein S14
P [auth Q]40S ribosomal protein S15
R [auth S]40S ribosomal protein S17
S [auth T]40S ribosomal protein S18
T [auth U]40S ribosomal protein S19
U [auth V]40S ribosomal protein S20
V [auth W]40S ribosomal protein S15a
W [auth X]40S ribosomal protein S23
X [auth Y]40S ribosomal protein S24
Y [auth Z]40S ribosomal protein S21
AA [auth b]40S ribosomal protein S27
BA [auth c]40S ribosomal protein S26
CA [auth d]40S ribosomal protein S28
DA [auth e]40S ribosomal protein S30
EA [auth f]40S ribosomal protein S29
FA [auth g]Ribosomal protein S27a
GA [auth j]Receptor of activated protein C kinase 1
HA [auth 2]18S ribosomal RNA---
IA [auth i]Non-structural protein 1
JA [auth u]Pre-rRNA-processing protein TSR1 homolog
Q [auth R]40S ribosomal protein S16
Z [auth a]40S ribosomal protein S25

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
A [auth B]IPR001865Small ribosomal subunit protein uS2Family
A [auth B]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
A [auth B]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
A [auth B]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
A [auth B]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
A [auth B]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
B [auth C]IPR001593Small ribosomal subunit protein eS1Family
B [auth C]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
B [auth C]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
C [auth D]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
C [auth D]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
C [auth D]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
C [auth D]IPR000851Small ribosomal subunit protein uS5Family
C [auth D]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
C [auth D]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
C [auth D]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
D [auth E]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
D [auth E]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
D [auth E]IPR013845Small ribosomal subunit protein eS4, central regionDomain
D [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth E]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
D [auth E]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
D [auth E]IPR002942RNA-binding S4 domainDomain
D [auth E]IPR000876Small ribosomal subunit protein eS4Family
D [auth E]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
D [auth E]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth E]IPR005824KOWDomain
E [auth F]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
E [auth F]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
E [auth F]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
E [auth F]IPR004044K Homology domain, type 2Domain
E [auth F]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
E [auth F]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
E [auth F]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
F [auth G]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
F [auth G]IPR001377Small ribosomal subunit protein eS6Family
F [auth G]IPR014401Small ribosomal subunit protein eS6-likeFamily
G [auth H]IPR000554Small ribosomal subunit protein eS7Family
G [auth H]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
H [auth I]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
H [auth I]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
H [auth I]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
H [auth I]IPR001047Small ribosomal subunit protein eS8Family
I [auth J]IPR002942RNA-binding S4 domainDomain
I [auth J]IPR022801Small ribosomal subunit protein uS4Family
I [auth J]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
I [auth J]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
I [auth J]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
I [auth J]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
J [auth K]IPR023798Small ribosomal subunit protein uS7 domainDomain
J [auth K]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
J [auth K]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
J [auth K]IPR000235Small ribosomal subunit protein uS7Family
J [auth K]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
K [auth L]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
K [auth L]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
K [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth L]IPR000266Small ribosomal subunit protein uS17Family
K [auth L]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
L [auth M]IPR037447Small ribosomal subunit protein eS10Family
L [auth M]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
L [auth M]IPR005326Plectin/eS10, N-terminalDomain
M [auth N]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
M [auth N]IPR000589Small ribosomal subunit protein uS15Family
M [auth N]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
M [auth N]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
N [auth O]IPR000530Small ribosomal subunit protein eS12Family
N [auth O]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
N [auth O]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
N [auth O]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
O [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
O [auth P]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
O [auth P]IPR001971Small ribosomal subunit protein uS11Family
P [auth Q]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
P [auth Q]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
P [auth Q]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
P [auth Q]IPR002222Small ribosomal subunit protein uS19Family
R [auth S]IPR001210Small ribosomal subunit protein eS17Family
R [auth S]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
R [auth S]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
S [auth T]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
S [auth T]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
S [auth T]IPR001892Small ribosomal subunit protein uS13Family
S [auth T]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
T [auth U]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
T [auth U]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
T [auth U]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
T [auth U]IPR001266Small ribosomal subunit protein eS19Family
U [auth V]IPR027486Small ribosomal subunit protein uS10 domainDomain
U [auth V]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
U [auth V]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
U [auth V]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
U [auth V]IPR001848Small ribosomal subunit protein uS10Family
V [auth W]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
V [auth W]IPR000630Small ribosomal subunit protein uS8Family
V [auth W]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
W [auth X]IPR006032Small ribosomal subunit protein uS12Family
W [auth X]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
W [auth X]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
X [auth Y]IPR001976Small ribosomal subunit protein eS24Family
X [auth Y]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
X [auth Y]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
Y [auth Z]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
Y [auth Z]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
Y [auth Z]IPR001931Small ribosomal subunit protein eS21Family
AA [auth b]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
AA [auth b]IPR000592Small ribosomal subunit protein eS27Family
AA [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth c]IPR047864Ribosomal protein eS26, conserved siteConserved Site
BA [auth c]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
BA [auth c]IPR000892Small ribosomal subunit protein eS26Family
CA [auth d]IPR028626Ribosomal protein eS28 conserved siteConserved Site
CA [auth d]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth d]IPR000289Small ribosomal subunit protein eS28Family
DA [auth e]IPR019954Ubiquitin conserved siteConserved Site
DA [auth e]IPR000626Ubiquitin-like domainDomain
DA [auth e]IPR006846Small ribosomal subunit protein eS30Family
DA [auth e]IPR039415Ubiquitin-like protein FUBIDomain
DA [auth e]IPR019956Ubiquitin domainDomain
DA [auth e]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
EA [auth f]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
EA [auth f]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
EA [auth f]IPR001209Small ribosomal subunit protein uS14Family
EA [auth f]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
FA [auth g]IPR019954Ubiquitin conserved siteConserved Site
FA [auth g]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth g]IPR000626Ubiquitin-like domainDomain
FA [auth g]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
FA [auth g]IPR002906Small ribosomal subunit protein eS31Domain
FA [auth g]IPR019956Ubiquitin domainDomain
FA [auth g]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
GA [auth j]IPR019775WD40 repeat, conserved siteConserved Site
GA [auth j]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
GA [auth j]IPR045223Small ribosomal subunit protein RACK1-likeFamily
GA [auth j]IPR020472G-protein beta WD-40 repeatRepeat
GA [auth j]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
GA [auth j]IPR001680WD40 repeatRepeat
IA [auth i]IPR022733DPUP/SUD, C-terminal, betacoronavirusDomain
IA [auth i]IPR042515Non-structural protein NSP15, N-terminal domain superfamily, coronavirusHomologous Superfamily
IA [auth i]IPR043174Non-structural protein NSP15, middle domain superfamilyHomologous Superfamily
IA [auth i]IPR044315Nonstructural protein 14, betacoronavirusDomain
IA [auth i]IPR038123Non-structural protein NSP4, C-terminal superfamily, coronavirusHomologous Superfamily
IA [auth i]IPR042570Non-structural protein NSP3, nucleic acid-binding domain superfamily, betacoronavirusHomologous Superfamily
IA [auth i]IPR043178Papain-like protease, thumb domain superfamily, coronavirusHomologous Superfamily
IA [auth i]IPR046441RNA-dependent RNA polymerase, coronavirusDomain
IA [auth i]IPR044863Nidovirus RdRp-associated nucleotidyl transferase (NiRAN) domainDomain
IA [auth i]IPR044343Nonstructural protein 13, 1B domain, coronavirusDomain
IA [auth i]IPR038166Polyprotein cleavage domain PL2pro superfamily, betacoronavirusHomologous Superfamily
IA [auth i]IPR037227Endoribonuclease EndoU-likeHomologous Superfamily
IA [auth i]IPR027352Nonstructural protein 13, zinc-binding domain, coronavirus-likeDomain
IA [auth i]IPR009003Peptidase S1, PA clanHomologous Superfamily
IA [auth i]IPR013016Peptidase C16, coronavirusDomain
IA [auth i]IPR009466Non-structural protein 14, coronavirusDomain
IA [auth i]IPR044357NSP3, first ubiquitin-like (Ubl) domain, coronavirusDomain
IA [auth i]IPR046436Nidovirus 3'-5' exoribonuclease domainDomain
IA [auth i]IPR047570NSP12, interface domain, coronavirusDomain
IA [auth i]IPR018995RNA synthesis protein NSP10, coronavirusDomain
IA [auth i]IPR043615Nonstructural protein 2, N-terminal domain, coronavirusDomain
IA [auth i]IPR043177Papain-like protease, N-terminal domain superfamily, coronavirusHomologous Superfamily
IA [auth i]IPR043606Coronavirus replicase NSP15, N-terminal oligomerizationDomain
IA [auth i]IPR044330Nonstructural protein 15, N-terminal domain, alpha/beta-coronavirusDomain
IA [auth i]IPR041679DNA2/NAM7 helicase-like, C-terminalDomain
IA [auth i]IPR024375Non-structural protein NSP3, SUD-M domain, betacoronavirusDomain
IA [auth i]IPR014828Non-structural protein NSP7, coronavirusDomain
IA [auth i]IPR043503Papain-like viral protease, palm and finger domains, coronavirusHomologous Superfamily
IA [auth i]IPR014829Non-structural protein NSP8, coronavirusDomain
IA [auth i]IPR036499Non-structural protein NSP9 superfamily, coronavirusHomologous Superfamily
IA [auth i]IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
IA [auth i]IPR044389Non-structural protein 2, SARS-CoV-likeDomain
IA [auth i]IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IA [auth i]IPR008740Peptidase C30, coronavirusDomain
IA [auth i]IPR036333RNA synthesis protein NSP10 superfamily, coronavirusHomologous Superfamily
IA [auth i]IPR047573Non-structural protein 2, middle domain, coronavirusDomain
IA [auth i]IPR043472Macro domain-likeHomologous Superfamily
IA [auth i]IPR043609NendoU domain, nidovirusDomain
IA [auth i]IPR032592Non-structural protein NSP3, nucleic acid-binding domain, betacoronavirusDomain
IA [auth i]IPR043613Non-structural protein 2, C-terminal domain, coronavirusDomain
IA [auth i]IPR038083Non-structural protein NSP3A domain-like superfamilyHomologous Superfamily
IA [auth i]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
IA [auth i]IPR044351RNA-dependent RNA polymerase, SARS-CoV-likeDomain
IA [auth i]IPR024358Non-structural protein NSP3, N-terminal, betacoronavirusDomain
IA [auth i]IPR048673Nonstructural protein 13, stalk domain, coronavirusDomain
IA [auth i]IPR046435NSP14, guanine-N7-methyltransferase domain, coronavirusDomain
IA [auth i]IPR009469RNA-dependent RNA polymerase, N-terminal, coronavirusDomain
IA [auth i]IPR043611Coronavirus replicase NSP3, C-terminalDomain
IA [auth i]IPR044864Non-structural protein NSP3, SUD-N (Mac2) domain, betacoronavirusDomain
IA [auth i]IPR047566Coronavirus replicase NSP3, Y domainDomain
IA [auth i]IPR048672Nonstructural protein 13, zinc-binding domain, coronavirusDomain
IA [auth i]IPR043612Non-structural protein NSP4, N-terminal, coronavirusDomain
IA [auth i]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IA [auth i]IPR043608Nonstructural protein 15, middle domain, coronavirusDomain
IA [auth i]IPR044353NSP3, second ubiquitin-like (Ubl) domain, coronavirusDomain
IA [auth i]IPR037204Non-structural protein NSP7 superfamily, coronavirusHomologous Superfamily
IA [auth i]IPR046443NSP1, globular domain, alpha/betacoronavirusDomain
IA [auth i]IPR043610Non-structural protein 6, coronavirusDomain
IA [auth i]IPR027351(+) RNA virus helicase core domainDomain
IA [auth i]IPR044322Nonstructural protein 15, middle domain, alpha/betacoronavirusDomain
IA [auth i]IPR009461Non-structural protein NSP16, coronavirus-likeDomain
IA [auth i]IPR043477Peptidase C30, domain 3, coronavirusHomologous Superfamily
IA [auth i]IPR043478Non-structural protein NSP3, SUD-N (Mac2) domain superfamily, betacoronavirusHomologous Superfamily
IA [auth i]IPR038400Non-structural protein NSP3, SUD-M domain superfamily, betacoronavirusHomologous Superfamily
IA [auth i]IPR046442NSP1, C-terminal domain, betacoronavirusDomain
IA [auth i]IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IA [auth i]IPR044401NSP15, NendoU domain, coronavirusDomain
IA [auth i]IPR014822Non-structural protein NSP9, coronavirusDomain
IA [auth i]IPR038030NSP1 globular domain superfamily, betacoronavirusHomologous Superfamily
IA [auth i]IPR021590NSP1, globular domain, betacoronavirusDomain
IA [auth i]IPR044367Non-structural protein 6, betacoronavirusDomain
IA [auth i]IPR037230Non-structural protein NSP8 superfamily, coronavirusHomologous Superfamily
IA [auth i]IPR046440Arterivirus Nsp11 N-terminal/Coronavirus NSP15 middle domainDomain
IA [auth i]IPR032505Non-structural protein NSP4, C-terminal, coronavirusDomain
IA [auth i]IPR046438Nidovirus 2-O-methyltransferaseDomain
IA [auth i]IPR002589Macro domainDomain
IA [auth i]IPR047567Non-structural protein NSP3, group 2-specific marker domain, betacoronavirusDomain
IA [auth i]IPR044371Non-structural protein 3, X-domain-likeDomain
IA [auth i]IPR007094RNA-directed RNA polymerase, catalytic domainDomain
JA [auth u]IPR007034Ribosome biogenesis protein BMS1/TSR1, C-terminalDomain
JA [auth u]IPR030387Bms1/Tsr1-type G domainDomain
JA [auth u]IPR039761Ribosome biogenesis protein Bms1/Tsr1Family
JA [auth u]IPR012948AARP2CNDomain
Q [auth R]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
Q [auth R]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
Q [auth R]IPR000754Small ribosomal subunit protein uS9Family
Q [auth R]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
Z [auth a]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
Z [auth a]IPR004977Small ribosomal subunit protein eS25Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth B]PharosP08865
C [auth D]PharosP15880
D [auth E]PharosP62701
E [auth F]PharosP23396
F [auth G]PharosP62753
G [auth H]PharosP62081
H [auth I]PharosP62241
I [auth J]PharosP46781
J [auth K]PharosP46782
K [auth L]PharosP62280
L [auth M]PharosP46783
M [auth N]PharosP62277
N [auth O]PharosP25398
O [auth P]PharosP62263
P [auth Q]PharosP62841
R [auth S]PharosP08708
S [auth T]PharosP62269
T [auth U]PharosP39019
U [auth V]PharosP60866
V [auth W]PharosP62244
W [auth X]PharosP62266
X [auth Y]PharosP62847
Y [auth Z]PharosP63220
AA [auth b]PharosP42677
BA [auth c]PharosP62854
CA [auth d]PharosP62857
DA [auth e]PharosP62861
EA [auth f]PharosP62273
FA [auth g]PharosP62979
GA [auth j]PharosP63244
JA [auth u]PharosQ2NL82
Q [auth R]PharosP62249
Z [auth a]PharosP62851