6ZI1
Crystal structure of the isolated H. influenzae VapD toxin (D7N mutant)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth AAA] | CRISPR_Cas2 | e6zi1AAA1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: CRISPR_Cas2 | ECOD (1.6) |
B [auth BBB] | CRISPR_Cas2 | e6zi1BBB1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: CRISPR_Cas2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth AAA], B [auth BBB] | PF09827 | CRISPR associated protein Cas2 (CRISPR_Cas2) | CRISPR associated protein Cas2 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth AAA], B [auth BBB] | Endoribonuclease VapD | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth AAA], B [auth BBB] | IPR019199 | Virulence-associated protein D / CRISPR associated protein Cas2 | Family |
A [auth AAA], B [auth BBB] | IPR016368 | Endoribonuclease VapD | Family |