6Z5U
Cryo-EM structure of the A. baumannii MlaBDEF complex bound to APPNHP
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
J [auth K] | SCOP2 Family | ABC transporter ATPase domain-like | 8103055 | 4003976 | SCOP2 (2022-06-29) |
J [auth K] | SCOP2 Superfamily | ABC transporter-like P-loop ATPases | 8103056 | 3002020 | SCOP2 (2022-06-29) |
K [auth L] | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8103056 | 3002020 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF13466 | e6z5uC1 | A: a/b three-layered sandwiches | X: SpoIIaa-like (From Topology) | H: SpoIIaa-like (From Topology) | T: SpoIIaa-like | F: PF13466 | ECOD (1.6) |
D | PF13466 | e6z5uD1 | A: a/b three-layered sandwiches | X: SpoIIaa-like (From Topology) | H: SpoIIaa-like (From Topology) | T: SpoIIaa-like | F: PF13466 | ECOD (1.6) |
E | PF02470 | e6z5uE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Mammalian cell entry (MCE) domain | F: PF02470 | ECOD (1.6) |
F [auth G] | PF02470 | e6z5uG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Mammalian cell entry (MCE) domain | F: PF02470 | ECOD (1.6) |
G [auth H] | PF02470 | e6z5uH1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Mammalian cell entry (MCE) domain | F: PF02470 | ECOD (1.6) |
H [auth I] | PF02470 | e6z5uI1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Mammalian cell entry (MCE) domain | F: PF02470 | ECOD (1.6) |
I [auth J] | PF02470 | e6z5uJ1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Mammalian cell entry (MCE) domain | F: PF02470 | ECOD (1.6) |
L [auth F] | PF02470 | e6z5uF1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Mammalian cell entry (MCE) domain | F: PF02470 | ECOD (1.6) |
J [auth K] | PF00005 | e6z5uK1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00005 | ECOD (1.6) |
K [auth L] | PF00005 | e6z5uL1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00005 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02405 | Permease MlaE (MlaE) | Permease MlaE | - | Family | |
PF13466 | STAS domain (STAS_2) | STAS domain | The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding ... | Domain | |
PF02470 | MlaD protein (MlaD) | MlaD protein | - | Family | |
J [auth K], K [auth L] | PF00005 | ABC transporter (ABC_tran) | ABC transporter | ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR030802 | ABC transporter permease MalE | Family | |
IPR003453 | ABC transport permease subunit MlaE, proteobacteria | Family | |
IPR036513 | STAS domain superfamily | Homologous Superfamily | |
IPR002645 | STAS domain | Domain | |
IPR003399 | Mce/MlaD | Domain | |
J [auth K], K [auth L] | IPR003593 | AAA+ ATPase domain | Domain |
J [auth K], K [auth L] | IPR003439 | ABC transporter-like, ATP-binding domain | Domain |
J [auth K], K [auth L] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | ABC transporters | MlaD/MlaE transporter |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |