6YXX | pdb_00006yxx

State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
VA [auth BQ]	SCOP2B Superfamily	Cyclophilin-like	8065077	3000168	SCOP2B (2022-06-29)
YA [auth ER]	SCOP2B Superfamily	ACP-like	8095575	3001805	SCOP2B (2022-06-29)
MB [auth BZ]	SCOP2B Superfamily	Cyclophilin-like	8065079	3000168	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth A1]	AAA	e6yxxA11	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: AAA	ECOD (v294.1)
H [auth A5]	AAA	e6yxxA51	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: AAA	ECOD (v294.1)
N [auth EA]	RNA_pol_Rpc34	e6yxxEA2	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNA_pol_Rpc34	ECOD (v294.1)
Z [auth EF]	Utp12	e6yxxEF1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Utp12	ECOD (v294.1)
EA [auth BI]	Utp12	e6yxxBI1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Utp12	ECOD (v294.1)
VA [auth BQ]	Utp12	e6yxxBQ1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Utp12	ECOD (v294.1)
YA [auth ER]	Utp12	e6yxxER1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Utp12	ECOD (v294.1)
YB [auth Al]	zf-CCHC	e6yxxAl1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: zf-CCHC	ECOD (v294.1)
G [auth E4]	Helicase_C	e6yxxE401	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F: Helicase_C	ECOD (v294.1)
MB [auth BZ]	Utp12	e6yxxBZ1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Utp12	ECOD (v294.1)
OA [auth AN]	Utp12	e6yxxAN1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Utp12	ECOD (v294.1)
T [auth ED]		e6yxxED01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
T [auth ED]		e6yxxED02	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
Q [auth EB]	Helicase_C	e6yxxEB01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F: Helicase_C	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth A2]	PF06984	Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)	Mitochondrial 39-S ribosomal protein L47 (MRP-L47)	-	Family
N [auth EA]	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal (KH_dom-like)	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal	The KH-like domain at the C-terminus of the EngA subfamily of essential bacterial GTPases has a unique domain structure position. The two adjacent GTPase domains (GD1 and GD2), two domains of family MMR_HSR1, Pfam:PF01926, pack at either side of the ...	The KH-like domain at the C-terminus of the EngA subfamily of essential bacterial GTPases has a unique domain structure position. The two adjacent GTPase domains (GD1 and GD2), two domains of family MMR_HSR1, Pfam:PF01926, pack at either side of the C-terminal domain. This C-terminal domain resembles a KH domain but is missing the distinctive RNA recognition elements. Conserved motifs of the nucleotide binding site of GD1 are integral parts of the GD1-KH domain interface, suggesting the interactions between these two domains are directly influenced by the GTP/GDP cycling of the protein. In contrast, the GD2-KH domain interface is distal to the GDP binding site of GD2. This family has not been added to the KH clan since SCOP classifies it separately due to its missing the key KH motif/fold.	Domain
N [auth EA]	PF01926	50S ribosome-binding GTPase (MMR_HSR1)	50S ribosome-binding GTPase	-	Family
R [auth EC]	PF00849	RNA pseudouridylate synthase (PseudoU_synth_2)	RNA pseudouridylate synthase	-	Family
HA [auth AK]	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
HA [auth AK]	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain		Domain
MA [auth EM]	PF01926	50S ribosome-binding GTPase (MMR_HSR1)	50S ribosome-binding GTPase	-	Family
VA [auth BQ]	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...	The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].	Domain
WA [auth AR]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
YA [auth ER]	PF00550	Phosphopantetheine attachment site (PP-binding)	Phosphopantetheine attachment site	A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...	A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.	Domain
MB [auth BZ]	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...	The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].	Domain
TA [auth AP]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.	Domain
OA [auth AN]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
DA [auth AI]	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain		Domain
U [auth AE]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth A1]	bL28m	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
B [auth E1]	mt-LAF21	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
C [auth A2]	uL29m	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast cell projection ciliary plasm cilium plasma membrane bounded cell projection protein-containing complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast cell projection ciliary plasm cilium plasma membrane bounded cell projection protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex nucleus nuclear lumen
D [auth E2]	DUF4379 domain-containing protein	-	-	-
E [auth A3]	uL30m	-	-	-
H [auth A5]	bL32m	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast nucleus
L [auth AA]	12S ribosomal RNA	-	-	-
M [auth BA]	mL67	-	-	-
N [auth EA]	mt-EngA	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
O [auth UA], TB [auth Uf]	UNK	-	-	-
R [auth EC]	Pseudouridylate synthase, putative	RNA binding binding nucleic acid binding isomerase activity pseudouridine synthase activity catalytic activity intramolecular transferase activity	RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process pseudouridine synthesis RNA modification macromolecule modification	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
S [auth BD]	mL70	-	-	-
W [auth EE]	SpoU_methylase domain-containing protein	RNA methyltransferase activity catalytic activity, acting on RNA transferase activity, transferring one-carbon groups catalytic activity, acting on a nucleic acid transferase activity methyltransferase activity catalytic activity RNA binding binding nucleic acid binding	methylation metabolic process cellular process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA processing methylation metabolic process cellular process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA processing macromolecule metabolic process	-
X [auth AF]	Ribosomal protein L4/L1 family, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
Y [auth BF]	Tetratricopeptide repeat	-	-	-
Z [auth EF]	SpoU_methylase domain-containing protein	RNA methyltransferase activity catalytic activity, acting on RNA transferase activity, transferring one-carbon groups catalytic activity, acting on a nucleic acid transferase activity methyltransferase activity catalytic activity RNA binding binding nucleic acid binding	methylation metabolic process cellular process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA processing methylation metabolic process cellular process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA processing macromolecule metabolic process	-
AA [auth EG]	mt-LAF7	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus intracellular organelle lumen organelle lumen membraneless organelle nuclear lumen
BA [auth BH]	mL74	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex
CA [auth EH]	mt-LAF8	-	-	-
EA [auth BI]	mL75	-	-	-
FA [auth UI], FC [auth Ur]	UNK	-	-	-
GA [auth BJ]	mL76	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
HA [auth AK]	Ribosomal protein L11, putative	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex
IA [auth BK]	Chaperone protein DNAj, putative	-	-	-
LA [auth EL]	mt-LAF12	-	-	-
MA [auth EM]	GTP-binding protein, putative	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
NA [auth UM]	UNK	-	-	-
PA [auth BN]	mL80	-	-	-
QA [auth EN]	mt-LAF14	-	-	-
RA [auth BO]	mL81	-	-	-
SA [auth EO], UA [auth EP]	mt-LAF15a	-	-	-
VA [auth BQ]	Peptidyl-prolyl cis-trans isomerase	binding cyclosporin A binding isomerase activity catalytic activity, acting on a protein peptidyl-prolyl cis-trans isomerase activity catalytic activity cis-trans isomerase activity	protein folding biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation	membrane-bounded organelle cell projection cellular anatomical structure intracellular anatomical structure ciliary plasm organelle cilium cytoplasm plasma membrane bounded cell projection protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix membrane-bounded organelle cell projection cellular anatomical structure intracellular anatomical structure ciliary plasm organelle cilium cytoplasm plasma membrane bounded cell projection protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen ribonucleoprotein complex nucleus nuclear lumen
WA [auth AR]	50S ribosomal protein L17, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit organellar ribosome ribonucleoprotein complex membraneless organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex intracellular membraneless organelle ribosomal subunit organellar ribosome ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial protein-containing complex mitochondrial ribosome organelle lumen
XA [auth BR]	mL84	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast
YA [auth ER]	Acyl carrier protein	phosphopantetheine-dependent carrier activity prosthetic group binding binding acyl carrier activity molecular carrier activity ACP phosphopantetheine attachment site binding acyl binding small molecule binding	fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process small molecule metabolic process metabolic process fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process lipid metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen
ZA [auth BS]	mL85	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex
BB [auth AT]	bL19m	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm
CB [auth BT]	mL86	-	-	-
DB [auth ET]	mt-LAF19	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
EB [auth AU]	bL20m	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
FB [auth BU]	mL87	-	-	-
GB [auth AV]	bL21m	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
HB [auth BV]	mL88	-	-	-
JB [auth BW]	mL89	-	regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process post-transcriptional regulation of gene expression regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process post-transcriptional regulation of gene expression regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
KB [auth AX]	uL23m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
PB [auth Bc]	mL95	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
RB [auth Af]	mL42	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
SB [auth Bf]	mL98	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast
UB [auth Ag]	L51_S25_CI-B8 domain-containing protein	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
XB [auth E9]	mt-LAF29	-	-	-
AC [auth Um]	UNK	-	-	-
BC [auth Un]	UNK	-	-	-
EC [auth Up]	UNK	-	-	-
IC [auth Av]	mL64	-	-	-
I [auth E5]	mt-LAF25	-	-	-
HC [auth At]	mL63	-	-	-
GC [auth Us]	UNK	-	-	-
DC [auth Ap]	mL53	-	-	-
CC [auth Ao]	mL52	-	-	-
ZB [auth Ul]	UNK	-	-	-
YB [auth Al]	mL49	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
WB [auth E8]	KRIPP9	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
VB [auth E7]	mt-LAF27	-	-	-
G [auth E4]	mt-LAF24	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
QB [auth Ae]	mL41	-	-	membrane-bounded organelle cell projection cellular anatomical structure intracellular anatomical structure ciliary plasm organelle cilium cytoplasm plasma membrane bounded cell projection protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix membrane-bounded organelle cell projection cellular anatomical structure intracellular anatomical structure ciliary plasm organelle cilium cytoplasm plasma membrane bounded cell projection protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen ribonucleoprotein complex nucleus nucleoplasm nuclear lumen
OB [auth Bb]	mL94	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast
NB [auth Ba]	mL93	-	-	-
MB [auth BZ]	Peptidyl-prolyl cis-trans isomerase	binding cyclosporin A binding isomerase activity catalytic activity, acting on a protein peptidyl-prolyl cis-trans isomerase activity catalytic activity cis-trans isomerase activity	protein folding biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast cell projection ciliary plasm cilium plasma membrane bounded cell projection protein-containing complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast cell projection ciliary plasm cilium plasma membrane bounded cell projection protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex nucleus
LB [auth AY]	uL24m	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
IB [auth AW]	uL22m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
F [auth E3]	mt-LAF23	-	-	-
AB [auth ES]	Lipase (Class 3)	-	primary metabolic process metabolic process cellular process lipid metabolic process	-
TA [auth AP]	Ribosomal_L18e/L15P domain-containing protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex
OA [auth AN]	50S ribosomal protein L13, putative	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
KA [auth BL]	mL78	-	-	-
JA [auth UK]	UNK	-	-	-
DA [auth AI]	RIBOSOMAL_L9 domain-containing protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast cell projection ciliary plasm cilium plasma membrane bounded cell projection protein-containing complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast cell projection ciliary plasm cilium plasma membrane bounded cell projection protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex nucleus nuclear lumen
V [auth BE]	mL71	-	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
U [auth AE]	Ribosomal protein L3 mitochondrial, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
T [auth ED]	mt-LAF4	RNA binding binding nucleic acid binding isomerase activity pseudouridine synthase activity catalytic activity intramolecular transferase activity	pseudouridine synthesis nucleobase-containing compound metabolic process RNA modification macromolecule modification RNA metabolic process metabolic process cellular process primary metabolic process macromolecule metabolic process nucleic acid metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex nucleus
Q [auth EB]	DEAD-box helicase, putative	translation factor activity translation initiation factor activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding translation factor activity translation initiation factor activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding hydrolase activity catalytic activity nucleic acid binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid helicase activity RNA helicase activity ATP-dependent activity, acting on RNA macromolecular conformation isomerase activity ATP-dependent activity	-	-
P [auth BB]	mL68	-	-	-
K [auth A8]	bL35m	-	-	-
J [auth E6]	KRIPP3	RNA binding binding nucleic acid binding mRNA binding	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle kinetoplast protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth A1]	IPR026569	Large ribosomal subunit protein bL28	Family
C [auth A2]	IPR038340	MRP-L47 superfamily, mitochondrial	Homologous Superfamily
C [auth A2]	IPR010729	Large ribosomal subunit protein uL29m, mitochondrial	Family
D [auth E2]	IPR025487	Treble clef zinc finger domain	Domain
E [auth A3]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
N [auth EA]	IPR005225	Small GTP-binding domain	Domain
N [auth EA]	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
N [auth EA]	IPR032859	GTPase Der, C-terminal KH-domain-like	Domain
N [auth EA]	IPR006073	GTP binding domain	Domain
N [auth EA]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
R [auth EC]	IPR020103	Pseudouridine synthase, catalytic domain superfamily	Homologous Superfamily
R [auth EC]	IPR050188	RluA Pseudouridine Synthase	Family
R [auth EC]	IPR006145	Pseudouridine synthase, RsuA/RluA-like	Domain
W [auth EE]	IPR001537	tRNA/rRNA methyltransferase, SpoU type	Domain
W [auth EE]	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	Homologous Superfamily
W [auth EE]	IPR051259	Ribosomal RNA Methyltransferase	Family
W [auth EE]	IPR029028	Alpha/beta knot methyltransferases	Homologous Superfamily
W [auth EE]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
X [auth AF]	IPR013005	Large ribosomal subunit protein uL4-like	Family
X [auth AF]	IPR002136	Large ribosomal subunit protein uL4	Family
X [auth AF]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
Y [auth BF]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
Z [auth EF]	IPR001537	tRNA/rRNA methyltransferase, SpoU type	Domain
Z [auth EF]	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	Homologous Superfamily
Z [auth EF]	IPR051259	Ribosomal RNA Methyltransferase	Family
Z [auth EF]	IPR029028	Alpha/beta knot methyltransferases	Homologous Superfamily
EA [auth BI]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
EA [auth BI]	IPR002885	Pentatricopeptide repeat	Repeat
HA [auth AK]	IPR020783	Large ribosomal subunit protein uL11, C-terminal	Domain
HA [auth AK]	IPR000911	Ribosomal protein uL11	Family
HA [auth AK]	IPR036769	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Homologous Superfamily
HA [auth AK]	IPR020784	Large ribosomal subunit protein uL11, N-terminal	Domain
HA [auth AK]	IPR036796	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Homologous Superfamily
IA [auth BK]	IPR001623	DnaJ domain	Domain
IA [auth BK]	IPR050817	DjlA DnaK co-chaperone	Family
IA [auth BK]	IPR036869	Chaperone J-domain superfamily	Homologous Superfamily
MA [auth EM]	IPR006073	GTP binding domain	Domain
MA [auth EM]	IPR023179	GTP-binding protein, orthogonal bundle domain superfamily	Homologous Superfamily
MA [auth EM]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
SA [auth EO], UA [auth EP]	IPR059193	mt-LAF15-like	Family
VA [auth BQ]	IPR029000	Cyclophilin-like domain superfamily	Homologous Superfamily
VA [auth BQ]	IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Domain
WA [auth AR]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
WA [auth AR]	IPR000456	Large ribosomal subunit protein bL17	Family
YA [auth ER]	IPR006162	Phosphopantetheine attachment site	PTM
YA [auth ER]	IPR009081	Phosphopantetheine binding ACP domain	Domain
YA [auth ER]	IPR036736	ACP-like superfamily	Homologous Superfamily
YA [auth ER]	IPR003231	Acyl carrier protein	Family
EB [auth AU]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
EB [auth AU]	IPR005813	Large ribosomal subunit protein bL20	Family
GB [auth AV]	IPR028909	Large ribosomal subunit protein bL21-like	Family
GB [auth AV]	IPR001787	Large ribosomal subunit protein bL21	Family
GB [auth AV]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
KB [auth AX]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
KB [auth AX]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
KB [auth AX]	IPR013025	Large ribosomal subunit protein uL23-like	Family
UB [auth Ag]	IPR007741	Ribosomal protein/NADH dehydrogenase domain	Domain
UB [auth Ag]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
UB [auth Ag]	IPR039927	Large ribosomal subunit protein mL43	Family
WB [auth E8]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
WB [auth E8]	IPR002885	Pentatricopeptide repeat	Repeat
G [auth E4]	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
OB [auth Bb]	IPR036873	Rhodanese-like domain superfamily	Homologous Superfamily
MB [auth BZ]	IPR029000	Cyclophilin-like domain superfamily	Homologous Superfamily
MB [auth BZ]	IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	Family
MB [auth BZ]	IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Domain
LB [auth AY]	IPR003256	Large ribosomal subunit protein uL24	Family
LB [auth AY]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
LB [auth AY]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
LB [auth AY]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
IB [auth AW]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
IB [auth AW]	IPR001063	Large ribosomal subunit protein uL22	Family
IB [auth AW]	IPR047867	Large ribosomal subunit protein uL22, bacteria/organella	Family
AB [auth ES]	IPR002921	Fungal lipase-type domain	Domain
AB [auth ES]	IPR029058	Alpha/Beta hydrolase fold	Homologous Superfamily
TA [auth AP]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
TA [auth AP]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
TA [auth AP]	IPR005749	Large ribosomal subunit protein uL15, bacteria	Family
OA [auth AN]	IPR005822	Large ribosomal subunit protein uL13	Family
OA [auth AN]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
DA [auth AI]	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
DA [auth AI]	IPR000244	Large ribosomal subunit protein bL9	Family
V [auth BE]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
U [auth AE]	IPR019927	Large ribosomal subunit protein uL3, bacteria/organella	Family
U [auth AE]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
U [auth AE]	IPR000597	Large ribosomal subunit protein uL3	Family
T [auth ED]	IPR020103	Pseudouridine synthase, catalytic domain superfamily	Homologous Superfamily
T [auth ED]	IPR042214	Pseudouridine synthase, TruD, catalytic domain	Homologous Superfamily
T [auth ED]	IPR001656	Pseudouridine synthase, TruD	Family
Q [auth EB]	IPR001650	Helicase, C-terminal domain-like	Domain
Q [auth EB]	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
Q [auth EB]	IPR014014	RNA helicase, DEAD-box type, Q motif	Domain
Q [auth EB]	IPR011545	DEAD/DEAH-box helicase domain	Domain
Q [auth EB]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
J [auth E6]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily