6YC6
Structure of C. glutamicum GlnK
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6yc6a1 | Alpha and beta proteins (a+b) | Ferredoxin-like | GlnB-like | automated matches | automated matches | (Corynebacterium glutamicum ) [TaxId: 1718 ], | SCOPe (2.08) |
A | d6yc6a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Corynebacterium glutamicum ) [TaxId: 1718 ], | SCOPe (2.08) |
B | d6yc6b_ | Alpha and beta proteins (a+b) | Ferredoxin-like | GlnB-like | automated matches | automated matches | (Corynebacterium glutamicum ) [TaxId: 1718 ], | SCOPe (2.08) |
C | d6yc6c_ | Alpha and beta proteins (a+b) | Ferredoxin-like | GlnB-like | automated matches | automated matches | (Corynebacterium glutamicum ) [TaxId: 1718 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Prokaryotic signal transducing protein | 8102854 | 4001256 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GlnB-like | 8102855 | 3001165 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | GlnB-like | 8102855 | 3001165 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | GlnB-like | 8102855 | 3001165 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | P-II | e6yc6A1 | A: a+b two layers | X: Alpha-beta plaits | H: GlnB-like (From Topology) | T: GlnB-like | F: P-II | ECOD (1.6) |
B | P-II | e6yc6B1 | A: a+b two layers | X: Alpha-beta plaits | H: GlnB-like (From Topology) | T: GlnB-like | F: P-II | ECOD (1.6) |
C | P-II | e6yc6C1 | A: a+b two layers | X: Alpha-beta plaits | H: GlnB-like (From Topology) | T: GlnB-like | F: P-II | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00543 | Nitrogen regulatory protein P-II (P-II) | Nitrogen regulatory protein P-II | P-II modulates the activity of glutamine synthetase. It is a tetrameric protein encoded by the glnB gene, a component of the adenylation cascade involved in the regulation of GS activity [1,2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015867 | Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal | Homologous Superfamily | |
IPR011322 | Nitrogen regulatory PII-like, alpha/beta | Homologous Superfamily | |
IPR002187 | Nitrogen regulatory protein PII | Family | |
IPR002332 | Nitrogen regulatory protein P-II, urydylation site | PTM | |
IPR017918 | Nitrogen regulatory protein PII, conserved site | Conserved Site |