6Y5K
Extended Intermediate form of X-31 Influenza Haemagglutinin at pH 5 (State IV)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8087826 | 3001342 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8087826 | 3001342 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8087826 | 3001342 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Hemagglutinin_1st | e6y5kA1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: Hemagglutinin_1st | ECOD (1.6) |
C | Hemagglutinin_1st | e6y5kC1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: Hemagglutinin_1st | ECOD (1.6) |
D [auth E] | Hemagglutinin_1st | e6y5kE1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: Hemagglutinin_1st | ECOD (1.6) |
B | Hemagglutinin_2nd | e6y5kB1 | A: alpha bundles | X: Hemagglutinin HA2 chain (From Topology) | H: Hemagglutinin HA2 chain (From Topology) | T: Hemagglutinin HA2 chain | F: Hemagglutinin_2nd | ECOD (1.6) |
E [auth D] | Hemagglutinin_2nd | e6y5kD1 | A: alpha bundles | X: Hemagglutinin HA2 chain (From Topology) | H: Hemagglutinin HA2 chain (From Topology) | T: Hemagglutinin HA2 chain | F: Hemagglutinin_2nd | ECOD (1.6) |
F | Hemagglutinin_2nd | e6y5kF1 | A: alpha bundles | X: Hemagglutinin HA2 chain (From Topology) | H: Hemagglutinin HA2 chain (From Topology) | T: Hemagglutinin HA2 chain | F: Hemagglutinin_2nd | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C, D [auth E] | IPR001364 | Haemagglutinin, influenzavirus A/B | Family |
A, C, D [auth E] | IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily |
A, C, D [auth E] | IPR000149 | Haemagglutinin, influenzavirus A | Family |
A, C, D [auth E] | IPR013828 | Haemagglutinin, HA1 chain, alpha/beta domain superfamily | Homologous Superfamily |
B, E [auth D], F | IPR001364 | Haemagglutinin, influenzavirus A/B | Family |
B, E [auth D], F | IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily |
B, E [auth D], F | IPR000149 | Haemagglutinin, influenzavirus A | Family |
B, E [auth D], F | IPR013828 | Haemagglutinin, HA1 chain, alpha/beta domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Glycoproteins | Influenza Hemagglutinin, ectodomain of X-31 Haemagglutinin at pH 8 |