6XKK | pdb_00006xkk

Cryo-EM structure of the NLRP1-CARD filament


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Z [auth d]WD40e6xkkd1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
Y [auth c]WD40e6xkkc1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
X [auth b]WD40e6xkkb1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
W [auth a]WD40e6xkka1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
VWD40e6xkkV1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
UWD40e6xkkU1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
TWD40e6xkkT1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
SWD40e6xkkS1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
RA [auth v]WD40e6xkkv1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
RWD40e6xkkR1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
QA [auth u]WD40e6xkku1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
QWD40e6xkkQ1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
PA [auth t]WD40e6xkkt1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
PWD40e6xkkP1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
OA [auth s]WD40e6xkks1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
OWD40e6xkkO1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
NA [auth r]WD40e6xkkr1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
NWD40e6xkkN1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
MA [auth q]WD40e6xkkq1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
MWD40e6xkkM1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
LA [auth p]WD40e6xkkp1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
LWD40e6xkkL1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
KA [auth o]WD40e6xkko1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
KWD40e6xkkK1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
JA [auth n]WD40e6xkkn1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
JWD40e6xkkJ1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
IA [auth m]WD40e6xkkm1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
IWD40e6xkkI1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
HA [auth l]WD40e6xkkl1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
HWD40e6xkkH1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
GA [auth k]WD40e6xkkk1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
GWD40e6xkkG1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
FA [auth j]WD40e6xkkj1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
FWD40e6xkkF1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
EA [auth i]WD40e6xkki1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
EWD40e6xkkE1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
DA [auth h]WD40e6xkkh1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
DWD40e6xkkD1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
CA [auth g]WD40e6xkkg1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
CWD40e6xkkC1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
BA [auth f]WD40e6xkkf1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
BWD40e6xkkB1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
AA [auth e]WD40e6xkke1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)
AWD40e6xkkA1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: WD40ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00619Caspase recruitment domain (CARD)Caspase recruitment domainMotif contained in proteins involved in apoptotic signaling. Predicted to possess a DEATH (Pfam:PF00531) domain-like fold . Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
NACHT, LRR and PYD domains-containing protein 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR051249NLRP InflammasomeFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR001611Leucine-rich repeatRepeat
IPR004020DAPIN domainDomain
IPR025307FIIND domainDomain
IPR007111NACHT nucleoside triphosphataseDomain
IPR011029Death-like domain superfamilyHomologous Superfamily
IPR033516CARD8/ASC/NALP1, CARD domainDomain
IPR041267NACHT, LRR and PYD domains-containing protein, helical domain HD2Domain
IPR041075NOD1/2, winged helix domainDomain
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
IPR001315CARD domainDomain

Pharos: Disease Associations Pharos Homepage Annotation