6XF8
DLP 5 fold
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth K] | SCOP2B Superfamily | Reovirus mu1 protein-like | 8091411 | 3002506 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | Reovirus mu1 protein-like | 8091411 | 3002506 | SCOP2B (2022-06-29) |
B [auth I] | SCOP2B Superfamily | Outer capsid protein sigma 3 | 8071741 | 3001282 | SCOP2B (2022-06-29) |
C [auth H] | SCOP2B Superfamily | Outer capsid protein sigma 3 | 8071741 | 3001282 | SCOP2B (2022-06-29) |
D [auth G] | SCOP2B Superfamily | Outer capsid protein sigma 3 | 8071741 | 3001282 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth K] | Reovirus_M2_2nd | e6xf8K3 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in membrane penetration protein mu1 (From Topology) | T: Jelly-roll domain in membrane penetration protein mu1 | F: Reovirus_M2_2nd | ECOD (1.6) |
A [auth K] | Reovirus_M2_3rd | e6xf8K1 | A: alpha arrays | X: Alpha-helical domain in membrane penetration protein mu1 (From Topology) | H: Alpha-helical domain in membrane penetration protein mu1 (From Topology) | T: Alpha-helical domain in membrane penetration protein mu1 | F: Reovirus_M2_3rd | ECOD (1.6) |
A [auth K] | Reovirus_M2_1st | e6xf8K2 | A: a+b complex topology | X: a+b domain in membrane penetration protein mu1 (From Topology) | H: a+b domain in membrane penetration protein mu1 (From Topology) | T: a+b domain in membrane penetration protein mu1 | F: Reovirus_M2_1st | ECOD (1.6) |
E [auth F] | Reovirus_M2_2nd | e6xf8F3 | A: beta sandwiches | X: jelly-roll | H: Jelly-roll domain in membrane penetration protein mu1 (From Topology) | T: Jelly-roll domain in membrane penetration protein mu1 | F: Reovirus_M2_2nd | ECOD (1.6) |
E [auth F] | Reovirus_M2_3rd | e6xf8F1 | A: alpha arrays | X: Alpha-helical domain in membrane penetration protein mu1 (From Topology) | H: Alpha-helical domain in membrane penetration protein mu1 (From Topology) | T: Alpha-helical domain in membrane penetration protein mu1 | F: Reovirus_M2_3rd | ECOD (1.6) |
E [auth F] | Reovirus_M2_1st | e6xf8F2 | A: a+b complex topology | X: a+b domain in membrane penetration protein mu1 (From Topology) | H: a+b domain in membrane penetration protein mu1 (From Topology) | T: a+b domain in membrane penetration protein mu1 | F: Reovirus_M2_1st | ECOD (1.6) |
B [auth I] | Reovirus_cap | e6xf8I1 | A: a+b complex topology | X: Outer capsid protein sigma 3-related (From Topology) | H: Outer capsid protein sigma 3-related (From Topology) | T: Outer capsid protein sigma 3-related | F: Reovirus_cap | ECOD (1.6) |
C [auth H] | Reovirus_cap | e6xf8H1 | A: a+b complex topology | X: Outer capsid protein sigma 3-related (From Topology) | H: Outer capsid protein sigma 3-related (From Topology) | T: Outer capsid protein sigma 3-related | F: Reovirus_cap | ECOD (1.6) |
D [auth G] | Reovirus_cap | e6xf8G1 | A: a+b complex topology | X: Outer capsid protein sigma 3-related (From Topology) | H: Outer capsid protein sigma 3-related (From Topology) | T: Outer capsid protein sigma 3-related | F: Reovirus_cap | ECOD (1.6) |
F [auth E] | Sigma_1_2 | e6xf8E1 | A: alpha complex topology | X: Core protein VP6 (From Topology) | H: Core protein VP6 (From Topology) | T: Core protein VP6 | F: Sigma_1_2 | ECOD (1.6) |
G [auth C] | lambda-1 | e6xf8C1 | A: a+b complex topology | X: Inner layer core protein p3-related (From Topology) | H: Inner layer core protein p3-related (From Topology) | T: Inner layer core protein p3-related | F: lambda-1 | ECOD (1.6) |
H [auth B] | lambda-1 | e6xf8B1 | A: a+b complex topology | X: Inner layer core protein p3-related (From Topology) | H: Inner layer core protein p3-related (From Topology) | T: Inner layer core protein p3-related | F: lambda-1 | ECOD (1.6) |
I [auth A] | Reovirus_L2_6th | e6xf8A5 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Reovirus_L2_6th | ECOD (1.6) |
I [auth A] | Reovirus_L2_7th | e6xf8A7 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Reovirus_L2_7th | ECOD (1.6) |
I [auth A] | Reovirus_L2_8th_1 | e6xf8A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Reovirus_L2_8th_1 | ECOD (1.6) |
I [auth A] | Reovirus_L2_4th | e6xf8A3 | A: a+b two layers | X: ferredoxin-like domain in VP1 (From Topology) | H: ferredoxin-like domain in VP1 (From Topology) | T: ferredoxin-like domain in VP1 | F: Reovirus_L2_4th | ECOD (1.6) |
I [auth A] | Reovirus_L2_2nd | e6xf8A1 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: Reovirus_L2_2nd | ECOD (1.6) |
I [auth A] | Reovirus_L2_1st | e6xf8A8 | A: a+b complex topology | X: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | H: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | T: Rotavirus NSP2 fragment, N-terminal domain | F: Reovirus_L2_1st | ECOD (1.6) |
I [auth A] | Reovirus_L2_3rd | e6xf8A6 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Reovirus_L2_3rd | ECOD (1.6) |
I [auth A] | Reovirus_L2_5th | e6xf8A4 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Reovirus_L2_5th | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth K], E [auth F] | PF05993 | Reovirus major virion structural protein Mu-1/Mu-1C (M2) (Reovirus_M2) | Reovirus major virion structural protein Mu-1/Mu-1C (M2) | - | Family |
B [auth I], C [auth H], D [auth G] | PF00979 | Reovirus outer capsid protein, Sigma 3 (Reovirus_cap) | Reovirus outer capsid protein, Sigma 3 | - | Family |
F [auth E] | PF03084 | Reoviral Sigma1/Sigma2 family (Sigma_1_2) | Reoviral Sigma1/Sigma2 family | - | Family |
G [auth C], H [auth B] | PF22033 | Inner capsid protein lambda-1/VP3 (Lamba1_VP3) | Inner capsid protein lambda-1/VP3 | The reovirus inner capsid protein lambda-1 displays nucleoside triphosphate phosphohydrolase (NTPase),RNA-5'-triphosphatase (RTPase), and RNA helicase activity and may play a role in the transcription of the virus genome, the unwinding or reannealing ... | Domain |
I [auth A] | PF21064 | Reovirus core-spike protein lambda-2 (L2), N-terminal (Reovirus_L2_N) | Reovirus core-spike protein lambda-2 (L2), N-terminal | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
I [auth A] | PF21063 | Reovirus core-spike protein lambda-2 (L2), GTase domain (Reovirus_L2_GTase) | Reovirus core-spike protein lambda-2 (L2), GTase domain | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
I [auth A] | PF21066 | Reovirus core-spike protein lambda-2 (L2), methyltransferase-2 (Reovirus_L2_MT2) | Reovirus core-spike protein lambda-2 (L2), methyltransferase-2 | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
I [auth A] | PF21065 | Reovirus core-spike protein lambda-2 (L2), methyltransferase-1 (Reovirus_L2_MT1) | Reovirus core-spike protein lambda-2 (L2), methyltransferase-1 | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
I [auth A] | PF21060 | Reovirus core-spike protein lambda-2 (L2), 6th domain (Reovirus_L2_6th) | Reovirus core-spike protein lambda-2 (L2), 6th domain | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
I [auth A] | PF06016 | Reovirus core-spike protein lambda-2 (L2), C-terminal (Reovirus_L2_8th) | Reovirus core-spike protein lambda-2 (L2), C-terminal | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
I [auth A] | PF21062 | Reovirus core-spike protein lambda-2 (L2), ferredoxin-like domain (Reovirus_L2_4th) | Reovirus core-spike protein lambda-2 (L2), ferredoxin-like domain | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
I [auth A] | PF21061 | Reovirus core-spike protein lambda-2 (L2), 7th domain (Reovirus_L2_7th) | Reovirus core-spike protein lambda-2 (L2), 7th domain | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |