Crystal structure of Fab fragment of Anti-HCV E2 antibody (HC84.26)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d6x9xb2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | automated matches | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| B | d6x9xb1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| A | d6x9xa_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Baculo_p26 | e6x9xB1 | A: beta barrels | X: cradle loop barrel | H: N-terminal domain of poxin | T: N-terminal domain of poxin | F: Baculo_p26 | ECOD (v294.2) |
| A | Baculo_p26 | e6x9xA1 | A: beta barrels | X: cradle loop barrel | H: N-terminal domain of poxin | T: N-terminal domain of poxin | F: Baculo_p26 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| Fab HC84.26, anti-HCV E2 | L-LAMBDA | Homo sapiens (human) | IGLV3-1*01, IGLJ2*01, IGLJ3*02, IGLJ3*01, IGKC*01 | V-DOMAIN V-LAMBDA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202617-0) | |
| Fab HC84.26, anti-HCV E2 | VH-CH1 | Homo sapiens (human) | IGHV1-69*01, IGHV1-69*12, IGHV1-69*13, IGHV1-69D*01, IGHV1-69*19, IGHJ1*01, IGHJ5*01, IGHJ5*02, IGHG1*03, IGHG1*08, IGHG1*06 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202617-0) |
