6X90
Structure of the guanine nucleotide exchange factor Sec12 bound to the small GTPase Sar1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | d6x90a1 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | automated matches | automated matches | Baker's yeast (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], | SCOPe (2.08) |
B [auth A] | d6x90a2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | Baker's yeast (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8060249 | 3002022 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | ANAPC4_WD40_2 | e6x90B1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_2 | ECOD (1.6) |
B [auth A] | Ras | e6x90A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
B [auth A] | PF00025 | ADP-ribosylation factor family (Arf) | ADP-ribosylation factor family | Pfam combines a number of different Prosite families together | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR001680 | WD40 repeat | Repeat |
A [auth B] | IPR045260 | Guanine nucleotide-exchange factor Sec12-like | Family |
A [auth B] | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
B [auth A] | IPR005225 | Small GTP-binding domain | Domain |
B [auth A] | IPR006687 | Small GTPase superfamily, SAR1-type | Family |
B [auth A] | IPR006689 | Small GTPase superfamily, ARF/SAR type | Family |
B [auth A] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |