6X3D
Crystal structure of PT3388 bound to HIF2a-B*:ARNT-B* complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6x3da1 | Alpha and beta proteins (a+b) | Profilin-like | PYP-like sensor domain (PAS domain) | Hypoxia-inducible factor Hif2a, C-terminal domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d6x3da2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d6x3db_ | Alpha and beta proteins (a+b) | Profilin-like | PYP-like sensor domain (PAS domain) | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PAS_11 | e6x3dA1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PAS_11 | ECOD (1.6) |
B | PAS_11 | e6x3dB1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PAS_11 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14598 | PAS domain (PAS_11) | PAS domain | This family includes the PAS-B domain of NCOA1 (Nuclear receptor coactivator 1), which binds to an LXXLL motif in the C-terminal region of STAT6 (Signal transducer and activator of transcription 6) [1]. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR021537 | Hypoxia-inducible factor, alpha subunit-like | Domain | |
IPR014887 | HIF-1 alpha, C-terminal transactivation domain | Domain | |
IPR013767 | PAS fold | Domain | |
IPR001067 | Nuclear translocator | Family | |
IPR000014 | PAS domain | Domain | |
IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | Domain | |
IPR035965 | PAS domain superfamily | Homologous Superfamily | |
IPR001610 | PAC motif | Repeat | |
IPR036638 | Helix-loop-helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR050933 | Circadian Clock Transcription Factors | Family | |
IPR013767 | PAS fold | Domain | |
IPR001067 | Nuclear translocator | Family | |
IPR000014 | PAS domain | Domain | |
IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | Domain | |
IPR035965 | PAS domain superfamily | Homologous Superfamily | |
IPR001610 | PAC motif | Repeat | |
IPR036638 | Helix-loop-helix DNA-binding domain superfamily | Homologous Superfamily |