6X06
Nup120 (aa1-757) from S. cerevisiae bound by VHH-SAN11
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Nup160 | e6x06A2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Nup160 | ECOD (1.6) |
A | EUF08019 | e6x06A1 | A: alpha arrays | X: Nucleoporin NUP120 helical domain (From Topology) | H: Nucleoporin NUP120 helical domain (From Topology) | T: Nucleoporin NUP120 helical domain | F: EUF08019 | ECOD (1.6) |
B [auth K] | V-set_12 | e6x06K1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth K] | Heavy Chain | IGHV1 | - | nucleoporin nup120 | SAbDab (2024-10-04) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22114 | Nucleoporin NUP120, helical domain (NUP120_helical_2) | Nucleoporin NUP120, helical domain | This domain is found in Nucleoporin NUP120 from Saccharomyces cerevisiae and similar fungal sequences. NUP120 is a a component of the nuclear pore complex (NPC) involved in nuclear poly(A)+ RNA and pre-ribosome export, in GSP1 nuclear import, in NPC ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR021717 | Nucleoporin Nup120/160 | Family |