6WPC

Crystal structure of Bacillus thuringiensis Cry1A.2 tryptic core variant

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6wpca3	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
A	d6wpca2	All beta proteins	beta-Prism I	delta-Endotoxin (insectocide), middle domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
A	d6wpca1	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains	delta-Endotoxin (insectocide), N-terminal domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
B	d6wpcb3	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
B	d6wpcb2	All beta proteins	beta-Prism I	delta-Endotoxin (insectocide), middle domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
B	d6wpcb1	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains	delta-Endotoxin (insectocide), N-terminal domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
C	d6wpcc3	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
C	d6wpcc2	All beta proteins	beta-Prism I	delta-Endotoxin (insectocide), middle domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
C	d6wpcc1	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains	delta-Endotoxin (insectocide), N-terminal domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
D	d6wpcd3	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
D	d6wpcd2	All beta proteins	beta-Prism I	delta-Endotoxin (insectocide), middle domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
D	d6wpcd1	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains	delta-Endotoxin (insectocide), N-terminal domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	delta-Endotoxin (insectocide), middle domain	8104331	3001725	SCOP2B (2022-06-29)
B	SCOP2 Family	delta-Endotoxin (insectocide), middle domain	8104330	4002768	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	delta-Endotoxin (insectocide), middle domain	8104331	3001725	SCOP2 (2022-06-29)
C	SCOP2B Superfamily	delta-Endotoxin (insectocide), middle domain	8104331	3001725	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	delta-Endotoxin (insectocide), middle domain	8104331	3001725	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Endotoxin_C	e6wpcA3	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: Endotoxin_C	ECOD (1.6)
A	Endotoxin_M	e6wpcA2	A: beta duplicates or obligate multimers	X: beta-Prism I (From Topology)	H: beta-Prism I (From Topology)	T: beta-Prism I	F: Endotoxin_M	ECOD (1.6)
A	Endotoxin_N	e6wpcA1	A: alpha arrays	X: Toxins' membrane translocation domains	H: delta-Endotoxin (insectocide), N-terminal domain (From Topology)	T: delta-Endotoxin (insectocide), N-terminal domain	F: Endotoxin_N	ECOD (1.6)
B	Endotoxin_C	e6wpcB1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: Endotoxin_C	ECOD (1.6)
B	Endotoxin_M	e6wpcB2	A: beta duplicates or obligate multimers	X: beta-Prism I (From Topology)	H: beta-Prism I (From Topology)	T: beta-Prism I	F: Endotoxin_M	ECOD (1.6)
B	Endotoxin_N	e6wpcB3	A: alpha arrays	X: Toxins' membrane translocation domains	H: delta-Endotoxin (insectocide), N-terminal domain (From Topology)	T: delta-Endotoxin (insectocide), N-terminal domain	F: Endotoxin_N	ECOD (1.6)
C	Endotoxin_C	e6wpcC1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: Endotoxin_C	ECOD (1.6)
C	Endotoxin_M	e6wpcC2	A: beta duplicates or obligate multimers	X: beta-Prism I (From Topology)	H: beta-Prism I (From Topology)	T: beta-Prism I	F: Endotoxin_M	ECOD (1.6)
C	Endotoxin_N	e6wpcC3	A: alpha arrays	X: Toxins' membrane translocation domains	H: delta-Endotoxin (insectocide), N-terminal domain (From Topology)	T: delta-Endotoxin (insectocide), N-terminal domain	F: Endotoxin_N	ECOD (1.6)
D	Endotoxin_C	e6wpcD2	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: Endotoxin_C	ECOD (1.6)
D	Endotoxin_M	e6wpcD3	A: beta duplicates or obligate multimers	X: beta-Prism I (From Topology)	H: beta-Prism I (From Topology)	T: beta-Prism I	F: Endotoxin_M	ECOD (1.6)
D	Endotoxin_N	e6wpcD1	A: alpha arrays	X: Toxins' membrane translocation domains	H: delta-Endotoxin (insectocide), N-terminal domain (From Topology)	T: delta-Endotoxin (insectocide), N-terminal domain	F: Endotoxin_N	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00555	delta endotoxin (Endotoxin_M)	delta endotoxin	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Cry1A.2	protein binding binding signaling receptor binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001178	Pesticidal crystal protein, domain II	Domain
A, B, C, D	IPR036399	Pesticidal crystal protein, central domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.