6WOP
Crystal structure of gamma-aminobutyrate aminotransferase PuuE from Acinetobacter baumannii
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6wopa_ | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | PLP-dependent transferases | automated matches | automated matches | (Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 ) [TaxId: 575584 ], | SCOPe (2.08) |
B | d6wopb_ | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | PLP-dependent transferases | automated matches | automated matches | (Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 ) [TaxId: 575584 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | GABA-aminotransferase-like | 8095260 | 4000675 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | PLP-dependent transferases | 8095261 | 3000954 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | PLP-dependent transferases | 8095261 | 3000954 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Aminotran_3_C | e6wopA2 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: Aminotran_3_C | ECOD (1.6) |
A | Aminotran_3_N | e6wopA1 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: Aminotran_3_N | ECOD (1.6) |
B | Aminotran_3_C | e6wopB1 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: Aminotran_3_C | ECOD (1.6) |
B | Aminotran_3_N | e6wopB2 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: Aminotran_3_N | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00202 | Aminotransferase class-III (Aminotran_3) | Aminotransferase class-III | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR049704 | Aminotransferases class-III pyridoxal-phosphate attachment site | Conserved Site | |
IPR050103 | Class-III Pyridoxal-phosphate-dependent Aminotransferase | Family | |
IPR015424 | Pyridoxal phosphate-dependent transferase | Homologous Superfamily | |
IPR005814 | Aminotransferase class-III | Family | |
IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | Homologous Superfamily | |
IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | Homologous Superfamily | |
IPR004632 | 4-aminobutyrate aminotransferase, bacterial | Family |