6WDH

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth b]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
A [auth b]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
B [auth c]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
C [auth d]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
D [auth e]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
E [auth f]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
E [auth f]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
F [auth g]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
F [auth g]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)
G [auth h]SCOP2B SuperfamilyRibosomal protein L10-like 8079773 3000665 SCOP2B (2022-06-29)
H [auth i]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like 8032963 3000950 SCOP2B (2022-06-29)
H [auth i]SCOP2B SuperfamilyRibosomal protein L11, C-terminal domain 8032961 3001186 SCOP2B (2022-06-29)
I [auth j]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
J [auth k]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
K [auth l]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
L [auth m]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
M [auth n]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
N [auth o]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
O [auth p]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
P [auth q]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
Q [auth r]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
R [auth s]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
S [auth t]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
T [auth u]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
U [auth v]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
V [auth w]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
W [auth x]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
X [auth y]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
Y [auth z]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
Z [auth B]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
AA [auth C]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
CA [auth E]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
DA [auth F]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
EA [auth G]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
GA [auth I]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
IA [auth K]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
JA [auth L]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
KA [auth M]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
LA [auth N]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
MA [auth O]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
NA [auth P]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
OA [auth Q]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
PA [auth R]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
QA [auth S]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
RA [auth T]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
SA [auth U]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
TA [auth V]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
VA [auth X]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
XA [auth Z]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth b]Ribosomal_L2_1e6wdhb2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
A [auth b]Ribosomal_L2_Ce6wdhb1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
B [auth c]Ribosomal_L3e6wdhc1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
C [auth d]Ribosomal_L4e6wdhd1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
D [auth e]Ribosomal_L5_Ce6wdhe1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
E [auth f]Ribosomal_L6e6wdhf2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
E [auth f]Ribosomal_L6_1e6wdhf1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
F [auth g]Ribosomal_L9_Ne6wdhg1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
F [auth g]Ribosomal_L9_C_1e6wdhg2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_C_1ECOD (1.6)
G [auth h]Ribosomal_L10e6wdhh1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
H [auth i]Ribosomal_L11e6wdhi2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
H [auth i]Ribosomal_L11_Ne6wdhi1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
I [auth j]Ribosomal_L13e6wdhj1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
J [auth k]Ribosomal_L14e6wdhk1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
K [auth l]Ribosomal_L27Ae6wdhl1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
L [auth m]Ribosomal_L16e6wdhm1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
M [auth n]Ribosomal_L17_1e6wdhn1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
N [auth o]Ribosomal_L18pe6wdho1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
O [auth p]Ribosomal_L19e6wdhp1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
P [auth q]Ribosomal_L20e6wdhq1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
Q [auth r]Ribosomal_L21pe6wdhr1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
R [auth s]Ribosomal_L22e6wdhs1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth t]Ribosomal_L23_2e6wdht1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
T [auth u]ribosomal_L24_1e6wdhu1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
U [auth v]Ribosomal_L25pe6wdhv1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
V [auth w]Ribosomal_L27e6wdhw1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
W [auth x]Ribosomal_L28e6wdhx1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
X [auth y]Ribosomal_L29e6wdhy1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
Y [auth z]Ribosomal_L30e6wdhz1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
Z [auth B]Ribosomal_L32pe6wdhB1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
AA [auth C]Ribosomal_L33e6wdhC1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
BA [auth D]Ribosomal_L34e6wdhD1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
CA [auth E]Ribosomal_L35pe6wdhE1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
DA [auth F]Ribosomal_L36e6wdhF1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
EA [auth G]Ribosomal_S2e6wdhG1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
FA [auth H]Ribosomal_S3_Ce6wdhH1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
FA [auth H]KH_2_1e6wdhH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
GA [auth I]S4e6wdhI1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
HA [auth J]Ribosomal_S5_Ce6wdhJ2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
HA [auth J]Ribosomal_S5e6wdhJ1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
IA [auth K]Ribosomal_S6e6wdhK1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
JA [auth L]Ribosomal_S7_1e6wdhL1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
KA [auth M]Ribosomal_S8_Ne6wdhM2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
KA [auth M]Ribosomal_S8_Ce6wdhM1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
LA [auth N]Ribosomal_S9e6wdhN1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
MA [auth O]Ribosomal_S10e6wdhO1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
NA [auth P]Ribosomal_S11e6wdhP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
OA [auth Q]Ribosom_S12_S23e6wdhQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
PA [auth R]Ribosomal_S13_1e6wdhR1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
QA [auth S]Ribosomal_S14_1e6wdhS1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
RA [auth T]Ribosomal_S15_1e6wdhT1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
SA [auth U]Ribosomal_S16e6wdhU1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
TA [auth V]Ribosomal_S17_1e6wdhV1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
UA [auth W]Ribosomal_S18e6wdhW1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
VA [auth X]Ribosomal_S19e6wdhX1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
WA [auth Y]Ribosomal_S20pe6wdhY1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
XA [auth Z]Ribosomal_S21e6wdhZ1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21ECOD (1.6)
YA [auth a]Ribosomal_L1_2nd_1e6wdha1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
Z [auth B]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
Z [auth B]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
AA [auth C]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
AA [auth C]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
BA [auth D]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
BA [auth D]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
CA [auth E]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
CA [auth E]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
DA [auth F]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
DA [auth F]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
EA [auth G]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
EA [auth G]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
EA [auth G]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
FA [auth H]PF07650KH domain (KH_2)KH domain- Domain
FA [auth H]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
FA [auth H]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
GA [auth I]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
GA [auth I]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
GA [auth I]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
GA [auth I]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
HA [auth J]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
HA [auth J]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
HA [auth J]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
IA [auth K]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
IA [auth K]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
JA [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
JA [auth L]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
KA [auth M]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
KA [auth M]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
LA [auth N]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
LA [auth N]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
MA [auth O]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
NA [auth P]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
OA [auth Q]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
OA [auth Q]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
PA [auth R]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
PA [auth R]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
QA [auth S]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
QA [auth S]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
RA [auth T]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
RA [auth T]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
SA [auth U]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
SA [auth U]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
SA [auth U]PF00467KOW motif (KOW)KOW motif- Family
TA [auth V]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
TA [auth V]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
UA [auth W]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
VA [auth X]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
VA [auth X]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
WA [auth Y]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
WA [auth Y]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
XA [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
XA [auth Z]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth b]50S ribosomal protein L2
B [auth c]50S ribosomal protein L3
C [auth d]50S ribosomal protein L4
D [auth e]50S ribosomal protein L5
E [auth f]50S ribosomal protein L6
F [auth g]50S ribosomal protein L9
G [auth h]50S ribosomal protein L10
H [auth i]50S ribosomal protein L11
I [auth j]50S ribosomal protein L13
J [auth k]50S ribosomal protein L14
K [auth l]50S ribosomal protein L15
L [auth m]50S ribosomal protein L16
M [auth n]50S ribosomal protein L17
N [auth o]50S ribosomal protein L18
O [auth p]50S ribosomal protein L19
P [auth q]50S ribosomal protein L20
Q [auth r]50S ribosomal protein L21
R [auth s]50S ribosomal protein L22
S [auth t]50S ribosomal protein L23
T [auth u]50S ribosomal protein L24
U [auth v]50S ribosomal protein L25
V [auth w]50S ribosomal protein L27
W [auth x]50S ribosomal protein L28
X [auth y]50S ribosomal protein L29
Y [auth z]50S ribosomal protein L30
Z [auth B]50S ribosomal protein L32
AA [auth C]50S ribosomal protein L33
BA [auth D]50S ribosomal protein L34
CA [auth E]50S ribosomal protein L35
DA [auth F]50S ribosomal protein L36
EA [auth G]30S ribosomal protein S2
FA [auth H]30S ribosomal protein S3
GA [auth I]30S ribosomal protein S4
HA [auth J]30S ribosomal protein S5
IA [auth K]30S ribosomal protein S6
JA [auth L]30S ribosomal protein S7
KA [auth M]30S ribosomal protein S8
LA [auth N]30S ribosomal protein S9
MA [auth O]30S ribosomal protein S10
NA [auth P]30S ribosomal protein S11
OA [auth Q]30S ribosomal protein S12
PA [auth R]30S ribosomal protein S13
QA [auth S]30S ribosomal protein S14
RA [auth T]30S ribosomal protein S15
SA [auth U]30S ribosomal protein S16
TA [auth V]30S ribosomal protein S17
UA [auth W]30S ribosomal protein S18
VA [auth X]30S ribosomal protein S19
WA [auth Y]30S ribosomal protein S20
XA [auth Z]30S ribosomal protein S21
YA [auth a]50S ribosomal protein L1
ZA [auth 3]16S ribosomal RNA---
AB [auth 1]23S ribosomal RNA---
BB [auth 2]5S ribosomal RNA---
CB [auth 5],
DB [auth 6]
tRNAfMet---
EB [auth 4]mRNA---
FB [auth 7]tRNAPhe---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth b]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
A [auth b]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
A [auth b]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
A [auth b]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
A [auth b]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
A [auth b]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A [auth b]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
A [auth b]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
A [auth b]IPR002171Large ribosomal subunit protein uL2Family
B [auth c]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
B [auth c]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
B [auth c]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
B [auth c]IPR000597Large ribosomal subunit protein uL3Family
C [auth d]IPR013005Large ribosomal subunit protein uL4-likeFamily
C [auth d]IPR002136Large ribosomal subunit protein uL4Family
C [auth d]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
D [auth e]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
D [auth e]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
D [auth e]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
D [auth e]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
D [auth e]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
D [auth e]IPR002132Large ribosomal subunit protein uL5Family
E [auth f]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
E [auth f]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
E [auth f]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
E [auth f]IPR000702Large ribosomal subunit protein uL6-likeFamily
E [auth f]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
F [auth g]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
F [auth g]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
F [auth g]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
F [auth g]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
F [auth g]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
F [auth g]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
F [auth g]IPR000244Large ribosomal subunit protein bL9Family
G [auth h]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
G [auth h]IPR001790Large ribosomal subunit protein uL10Family
G [auth h]IPR022973Large ribosomal subunit protein uL10, bacterialFamily
G [auth h]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
G [auth h]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
H [auth i]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
H [auth i]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
H [auth i]IPR000911Ribosomal protein uL11Family
H [auth i]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
H [auth i]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
H [auth i]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
H [auth i]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
I [auth j]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
I [auth j]IPR005822Large ribosomal subunit protein uL13Family
I [auth j]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
I [auth j]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
J [auth k]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
J [auth k]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
J [auth k]IPR000218Large ribosomal subunit protein uL14Family
J [auth k]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
K [auth l]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
K [auth l]IPR021131Large ribosomal subunit protein uL15/eL18Domain
K [auth l]IPR030878Large ribosomal subunit protein uL15Family
K [auth l]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
K [auth l]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
L [auth m]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth m]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
L [auth m]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
L [auth m]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth m]IPR047873Large ribosomal subunit protein uL16Family
M [auth n]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
M [auth n]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
M [auth n]IPR000456Large ribosomal subunit protein bL17Family
N [auth o]IPR005484Large ribosomal subunit protein uL18Family
N [auth o]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
O [auth p]IPR001857Large ribosomal subunit protein bL19Family
O [auth p]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
O [auth p]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
O [auth p]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth q]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
P [auth q]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
P [auth q]IPR005813Large ribosomal subunit protein bL20Family
Q [auth r]IPR028909Large ribosomal subunit protein bL21-likeFamily
Q [auth r]IPR001787Large ribosomal subunit protein bL21Family
Q [auth r]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
Q [auth r]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
R [auth s]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
R [auth s]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth s]IPR001063Large ribosomal subunit protein uL22Family
R [auth s]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth s]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
S [auth t]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth t]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
S [auth t]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
S [auth t]IPR013025Large ribosomal subunit protein uL23-likeFamily
T [auth u]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth u]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth u]IPR003256Large ribosomal subunit protein uL24Family
T [auth u]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
T [auth u]IPR005824KOWDomain
T [auth u]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
U [auth v]IPR020055Ribosomal protein bL25, short-formFamily
U [auth v]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
U [auth v]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
U [auth v]IPR050070Bacterial ribosomal protein bL25Family
U [auth v]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
V [auth w]IPR001684Large ribosomal subunit protein bL27Family
V [auth w]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
W [auth x]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
W [auth x]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
W [auth x]IPR026569Large ribosomal subunit protein bL28Family
W [auth x]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
X [auth y]IPR050063Universal ribosomal protein uL29Family
X [auth y]IPR001854Large ribosomal subunit protein uL29Family
X [auth y]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
X [auth y]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Y [auth z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
Y [auth z]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
Y [auth z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Y [auth z]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
Z [auth B]IPR002677Large ribosomal subunit protein bL32Family
Z [auth B]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth B]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
AA [auth C]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth C]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
AA [auth C]IPR001705Large ribosomal subunit protein bL33Family
AA [auth C]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
BA [auth D]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
BA [auth D]IPR000271Large ribosomal subunit protein bL34Family
CA [auth E]IPR021137Large ribosomal subunit protein bL35-likeFamily
CA [auth E]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
CA [auth E]IPR001706Large ribosomal subunit protein bL35Family
CA [auth E]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
DA [auth F]IPR000473Large ribosomal subunit protein bL36Family
DA [auth F]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
EA [auth G]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
EA [auth G]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
EA [auth G]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
EA [auth G]IPR001865Small ribosomal subunit protein uS2Family
FA [auth H]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
FA [auth H]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
FA [auth H]IPR004087K Homology domainDomain
FA [auth H]IPR004044K Homology domain, type 2Domain
FA [auth H]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
FA [auth H]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
FA [auth H]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
FA [auth H]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
GA [auth I]IPR002942RNA-binding S4 domainDomain
GA [auth I]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
GA [auth I]IPR022801Small ribosomal subunit protein uS4Family
GA [auth I]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
GA [auth I]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
GA [auth I]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
HA [auth J]IPR000851Small ribosomal subunit protein uS5Family
HA [auth J]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
HA [auth J]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
HA [auth J]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
HA [auth J]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
HA [auth J]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
HA [auth J]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IA [auth K]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
IA [auth K]IPR000529Small ribosomal subunit protein bS6Family
IA [auth K]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
IA [auth K]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
IA [auth K]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
JA [auth L]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
JA [auth L]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
JA [auth L]IPR000235Small ribosomal subunit protein uS7Family
JA [auth L]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
JA [auth L]IPR023798Small ribosomal subunit protein uS7 domainDomain
KA [auth M]IPR000630Small ribosomal subunit protein uS8Family
KA [auth M]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
KA [auth M]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
LA [auth N]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
LA [auth N]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
LA [auth N]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
LA [auth N]IPR000754Small ribosomal subunit protein uS9Family
LA [auth N]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MA [auth O]IPR027486Small ribosomal subunit protein uS10 domainDomain
MA [auth O]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
MA [auth O]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
MA [auth O]IPR001848Small ribosomal subunit protein uS10Family
NA [auth P]IPR001971Small ribosomal subunit protein uS11Family
NA [auth P]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
NA [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
NA [auth P]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
OA [auth Q]IPR005679Ribosomal protein uS12, bacterial-typeFamily
OA [auth Q]IPR006032Small ribosomal subunit protein uS12Family
OA [auth Q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
PA [auth R]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
PA [auth R]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
PA [auth R]IPR001892Small ribosomal subunit protein uS13Family
PA [auth R]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
PA [auth R]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
QA [auth S]IPR001209Small ribosomal subunit protein uS14Family
QA [auth S]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
QA [auth S]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
RA [auth T]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
RA [auth T]IPR000589Small ribosomal subunit protein uS15Family
RA [auth T]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
SA [auth U]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
SA [auth U]IPR000307Small ribosomal subunit protein bS16Family
SA [auth U]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
TA [auth V]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
TA [auth V]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
TA [auth V]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
TA [auth V]IPR000266Small ribosomal subunit protein uS17Family
UA [auth W]IPR001648Small ribosomal subunit protein bS18Family
UA [auth W]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
UA [auth W]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
VA [auth X]IPR002222Small ribosomal subunit protein uS19Family
VA [auth X]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
VA [auth X]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
VA [auth X]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
WA [auth Y]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
WA [auth Y]IPR002583Small ribosomal subunit protein bS20Family
XA [auth Z]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
XA [auth Z]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
XA [auth Z]IPR001911Small ribosomal subunit protein bS21Family
YA [auth a]IPR005878Large ribosomal subunit protein uL1, bacterial-typeFamily
YA [auth a]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
YA [auth a]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
YA [auth a]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
YA [auth a]IPR002143Large ribosomal subunit protein uL1Family
YA [auth a]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily