6WAT
complex structure of PHF1
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
AA [auth NA] | DUF4537 | e6watNA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
B [auth AC] | DUF4537 | e6watAC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
BA [auth NC] | DUF4537 | e6watNC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
C [auth BA] | DUF4537 | e6watBA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
CA [auth OA] | DUF4537 | e6watOA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
D [auth BC] | DUF4537 | e6watBC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
DA [auth OC] | DUF4537 | e6watOC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
E [auth CA] | DUF4537 | e6watCA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
F [auth CC] | DUF4537 | e6watCC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
G [auth DA] | DUF4537 | e6watDA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
H [auth DC] | DUF4537 | e6watDC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
J [auth EC] | DUF4537 | e6watEC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
K [auth FA] | DUF4537 | e6watFA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
L [auth FC] | DUF4537 | e6watFC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
N [auth GC] | DUF4537 | e6watGC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
O [auth HA] | DUF4537 | e6watHA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
P [auth HC] | DUF4537 | e6watHC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
Q [auth IA] | DUF4537 | e6watIA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
R [auth IC] | DUF4537 | e6watIC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
S [auth JA] | DUF4537 | e6watJA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
U [auth KA] | DUF4537 | e6watKA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
V [auth KC] | DUF4537 | e6watKC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
W [auth LA] | DUF4537 | e6watLA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
X [auth LC] | DUF4537 | e6watLC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
Y [auth MA] | DUF4537 | e6watMA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
Z [auth MC] | DUF4537 | e6watMC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
A [auth AA] | DUF4537 | e6watAA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
I [auth EA] | DUF4537 | e6watEA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
M [auth GA] | DUF4537 | e6watGA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
T [auth JC] | DUF4537 | e6watJC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: DUF4537 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18104 | Jumonji domain-containing protein 2A Tudor domain (Tudor_2) | Jumonji domain-containing protein 2A Tudor domain | This is the tudor domain found in histone demethylase Jumonji domain-containing protein 2A (JMJD2A). Structure and function analysis indicate that this domain can recognize equally well two unrelated histone peptides, H3K4me3 and H4K20me3, by means o ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR025894 | Polycomb-like MTF2 factor 2, C-terminal domain | Domain | |
IPR001965 | Zinc finger, PHD-type | Domain | |
IPR002999 | Tudor domain | Domain | |
IPR047010 | PHD finger protein 1, PHD finger 2 | Domain | |
IPR019787 | Zinc finger, PHD-finger | Domain | |
IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
IPR019786 | Zinc finger, PHD-type, conserved site | Conserved Site | |
IPR031202 | PHD finger protein 1, PHD finger 1 | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR047399 | PHD finger protein 1, Tudor domain | Domain | |
IPR040477 | Lysine-specific demethylase 4-like, Tudor domain | Domain | |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR007125 | Histone H2A/H2B/H3 | Domain | |
IPR000164 | Histone H3/CENP-A | Family |