6W6S
WT HTLV-1 Protease in Complex with Phosphonated UMass6 (PU6)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Acid proteases | 8102591 | 3001059 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Acid proteases | 8102591 | 3001059 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | RVP | e6w6sB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (1.6) |
B [auth A] | RVP | e6w6sA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF00077 | Retroviral aspartyl protease (RVP) | Retroviral aspartyl protease | Single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses). These proteases are generally part of a larger polyprotein; usually pol, more rarely gag. Retroviral proteases appear to be homologous to a ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR045345 | Retroviral nucleocapsid Gag protein p24, C-terminal domain | Domain |
A [auth B], B [auth A] | IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR001995 | Peptidase A2A, retrovirus, catalytic | Domain |
A [auth B], B [auth A] | IPR003139 | Delta-retroviral matrix protein | Domain |
A [auth B], B [auth A] | IPR001878 | Zinc finger, CCHC-type | Domain |
A [auth B], B [auth A] | IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily |
A [auth B], B [auth A] | IPR010999 | Retroviral matrix protein | Homologous Superfamily |
A [auth B], B [auth A] | IPR050195 | Primate lentivirus group Gag polyprotein | Family |
A [auth B], B [auth A] | IPR021109 | Aspartic peptidase domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR001969 | Aspartic peptidase, active site | Active Site |
A [auth B], B [auth A] | IPR018061 | Retropepsins | Domain |
A [auth B], B [auth A] | IPR008916 | Retrovirus capsid, C-terminal | Homologous Superfamily |