6VWK | pdb_00006vwk

E. coli ATP Synthase ADP Sub-state 3a Fo Focussed


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
J [auth S]d6vwks_ Membrane and cell surface proteins and peptides Transmembrane helix hairpin Rotary ATPase ring subunits F1F0 ATP synthase subunit C or V-type proton ATPase subunit c automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
I [auth R]d6vwkr_ Membrane and cell surface proteins and peptides Transmembrane helix hairpin Rotary ATPase ring subunits F1F0 ATP synthase subunit C or V-type proton ATPase subunit c automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
H [auth Q]d6vwkq_ Membrane and cell surface proteins and peptides Transmembrane helix hairpin Rotary ATPase ring subunits F1F0 ATP synthase subunit C or V-type proton ATPase subunit c automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
G [auth P]d6vwkp_ Membrane and cell surface proteins and peptides Transmembrane helix hairpin Rotary ATPase ring subunits F1F0 ATP synthase subunit C or V-type proton ATPase subunit c automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
F [auth O]d6vwko_ Membrane and cell surface proteins and peptides Transmembrane helix hairpin Rotary ATPase ring subunits F1F0 ATP synthase subunit C or V-type proton ATPase subunit c automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
E [auth N]d6vwkn_ Membrane and cell surface proteins and peptides Transmembrane helix hairpin Rotary ATPase ring subunits F1F0 ATP synthase subunit C or V-type proton ATPase subunit c automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
D [auth M]d6vwkm_ Membrane and cell surface proteins and peptides Transmembrane helix hairpin Rotary ATPase ring subunits F1F0 ATP synthase subunit C or V-type proton ATPase subunit c automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
C [auth L]d6vwkl_ Membrane and cell surface proteins and peptides Transmembrane helix hairpin Rotary ATPase ring subunits F1F0 ATP synthase subunit C or V-type proton ATPase subunit c automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
B [auth J]d6vwkj_ Membrane and cell surface proteins and peptides Transmembrane helix hairpin Rotary ATPase ring subunits F1F0 ATP synthase subunit C or V-type proton ATPase subunit c automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
A [auth I]d6vwki_ Membrane and cell surface proteins and peptides Transmembrane helix hairpin Rotary ATPase ring subunits F1F0 ATP synthase subunit C or V-type proton ATPase subunit c automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
M [auth a]SCOP2B SuperfamilyF1F0 ATP synthase subunit A 8037822 3000506 SCOP2B (2022-06-29)
J [auth S]SCOP2B SuperfamilyF1F0 ATP synthase subunit C 8037817 3000499 SCOP2B (2022-06-29)
I [auth R]SCOP2B SuperfamilyF1F0 ATP synthase subunit C 8037817 3000499 SCOP2B (2022-06-29)
H [auth Q]SCOP2B SuperfamilyF1F0 ATP synthase subunit C 8037817 3000499 SCOP2B (2022-06-29)
G [auth P]SCOP2B SuperfamilyF1F0 ATP synthase subunit C 8037817 3000499 SCOP2B (2022-06-29)
F [auth O]SCOP2B SuperfamilyF1F0 ATP synthase subunit C 8037817 3000499 SCOP2B (2022-06-29)
E [auth N]SCOP2B SuperfamilyF1F0 ATP synthase subunit C 8037817 3000499 SCOP2B (2022-06-29)
D [auth M]SCOP2B SuperfamilyF1F0 ATP synthase subunit C 8037817 3000499 SCOP2B (2022-06-29)
C [auth L]SCOP2B SuperfamilyF1F0 ATP synthase subunit C 8037817 3000499 SCOP2B (2022-06-29)
B [auth J]SCOP2B SuperfamilyF1F0 ATP synthase subunit C 8037817 3000499 SCOP2B (2022-06-29)
A [auth I]SCOP2B SuperfamilyF1F0 ATP synthase subunit C 8037817 3000499 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
M [auth a]SBP_bac_1e6vwka1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
J [auth S]SBP_bac_1e6vwkS1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
I [auth R]SBP_bac_1e6vwkR1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
H [auth Q]SBP_bac_1e6vwkQ1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
G [auth P]SBP_bac_1e6vwkP1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
F [auth O]SBP_bac_1e6vwkO1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
E [auth N]SBP_bac_1e6vwkN1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
D [auth M]SBP_bac_1e6vwkM1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
C [auth L]SBP_bac_1e6vwkL1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
B [auth J]SBP_bac_1e6vwkJ1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
A [auth I]SBP_bac_1e6vwkI1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
K [auth X],
L [auth Y]
PF00430ATP synthase B/B' CF(0) (ATP-synt_B)ATP synthase B/B' CF(0)- Coiled-coil
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
M [auth a]ATP synthase subunit a
K [auth X],
L [auth Y]
ATP synthase subunit b
ATP synthase subunit c

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
M [auth a]IPR023011ATP synthase, F0 complex, subunit A, active siteActive Site
M [auth a]IPR000568ATP synthase, F0 complex, subunit AFamily
M [auth a]IPR035908ATP synthase, F0 complex, subunit A superfamilyHomologous Superfamily
M [auth a]IPR045082ATP synthase, F0 complex, subunit A, bacterial/chloroplastFamily
K [auth X],
L [auth Y]
IPR002146ATP synthase, F0 complex, subunit b/b', bacterial/chloroplastFamily
K [auth X],
L [auth Y]
IPR005864ATP synthase, F0 complex, subunit b, bacterialFamily
K [auth X],
L [auth Y]
IPR050059ATP synthase B chainFamily
K [auth X],
L [auth Y]
IPR028987F-type ATP synthase subunit B-like, membrane domain superfamilyHomologous Superfamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR005953ATP synthase, F0 complex, subunit C, bacterial/chloroplastFamily
IPR038662F1F0 ATP synthase subunit C superfamilyHomologous Superfamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR020537ATP synthase, F0 complex, subunit C, DCCD-binding siteBinding Site
IPR000454ATP synthase, F0 complex, subunit CFamily