Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyFlavivirus capsid protein C 8096650 3001003 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFlavivirus capsid protein C 8096650 3001003 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFlavivirus capsid protein C 8096650 3001003 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFlavivirus capsid protein C 8096650 3001003 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyFlavivirus capsid protein C 8096650 3001003 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyFlavivirus capsid protein C 8096650 3001003 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFlavi_capside6vsoA1 A: alpha duplicates or obligate multimersX: Flavivirus capsid protein C (From Topology)H: Flavivirus capsid protein C (From Topology)T: Flavivirus capsid protein CF: Flavi_capsidECOD (1.6)
BFlavi_capside6vsoB1 A: alpha duplicates or obligate multimersX: Flavivirus capsid protein C (From Topology)H: Flavivirus capsid protein C (From Topology)T: Flavivirus capsid protein CF: Flavi_capsidECOD (1.6)
CFlavi_capside6vsoC1 A: alpha duplicates or obligate multimersX: Flavivirus capsid protein C (From Topology)H: Flavivirus capsid protein C (From Topology)T: Flavivirus capsid protein CF: Flavi_capsidECOD (1.6)
DFlavi_capside6vsoD1 A: alpha duplicates or obligate multimersX: Flavivirus capsid protein C (From Topology)H: Flavivirus capsid protein C (From Topology)T: Flavivirus capsid protein CF: Flavi_capsidECOD (1.6)
EFlavi_capside6vsoE1 A: alpha duplicates or obligate multimersX: Flavivirus capsid protein C (From Topology)H: Flavivirus capsid protein C (From Topology)T: Flavivirus capsid protein CF: Flavi_capsidECOD (1.6)
FFlavi_capside6vsoF1 A: alpha duplicates or obligate multimersX: Flavivirus capsid protein C (From Topology)H: Flavivirus capsid protein C (From Topology)T: Flavivirus capsid protein CF: Flavi_capsidECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.10.930 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A CATH (utative)
B1.10.10.930 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A CATH (utative)
C1.10.10.930 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A CATH (utative)
D1.10.10.930 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A CATH (utative)
E1.10.10.930 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A CATH (utative)
F1.10.10.930 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF01003Flavivirus capsid protein C (Flavi_capsid)Flavivirus capsid protein C- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Capsid premembrane protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR000208RNA-directed RNA polymerase, fingers/palm subdomains, flavivirusDomain
A, B, C, D, E
IPR014756Immunoglobulin E-setHomologous Superfamily
A, B, C, D, E
IPR001122Capsid protein C, flavivirusDomain
A, B, C, D, E
IPR027287Glycoprotein E, immunoglobulin-like domain, flavivirusDomain
A, B, C, D, E
IPR014412Genome polyprotein, FlavivirusFamily
A, B, C, D, E
IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B, C, D, E
IPR026490mRNA cap 0/1 methyltransferaseDomain
A, B, C, D, E
IPR009003Peptidase S1, PA clanHomologous Superfamily
A, B, C, D, E
IPR001650Helicase, C-terminal domain-likeDomain
A, B, C, D, E
IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
A, B, C, D, E
IPR013755Flaviviral glycoprotein E, central domain, subdomain 1Homologous Superfamily
A, B, C, D, E
IPR000752Flavivirus non-structural protein NS2ADomain
A, B, C, D, E
IPR047530RNA-dependent RNA polymerase, flavivirusDomain
A, B, C, D, E
IPR049486Flavivridae NS3 helicase, C-terminal helical domainDomain
A, B, C, D, E
IPR046811RNA-directed RNA polymerase, thumb subdomain, flavivirusDomain
A, B, C, D, E
IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
A, B, C, D, E
IPR002877Ribosomal RNA methyltransferase, FtsJ domainDomain
A, B, C, D, E
IPR038302Envelope glycoprotein M superfamily, flavivirusHomologous Superfamily
A, B, C, D, E
IPR000069Envelope glycoprotein M, flavivirusDomain
A, B, C, D, E
IPR011492Non-structural protein NS3-like, DEAD box helicase, flavivirusDomain
A, B, C, D, E
IPR038345Flavivirus envelope glycoprotein E, Stem/Anchor domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR038688Flavivirus polyprotein propeptide superfamilyHomologous Superfamily
A, B, C, D, E
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
A, B, C, D, E
IPR026470Flavivirus envelope glycoprotein E, Stem/Anchor domainDomain
A, B, C, D, E
IPR011998Envelope glycoprotein E, central and dimerisation domain, flavivirusDomain
A, B, C, D, E
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A, B, C, D, E
IPR037172Flavivirus capsid protein C superfamilyHomologous Superfamily
A, B, C, D, E
IPR000404Flavivirus non-structural protein NS4ADomain
A, B, C, D, E
IPR000487Non-structural protein NS2B, flavivirusDomain
A, B, C, D, E
IPR001528Flavivirus non-structural protein NS4BDomain
A, B, C, D, E
IPR001157Non-structural protein NS1, flavivirusDomain
A, B, C, D, E
IPR013756Flaviviral glycoprotein E, central domain, subdomain 2Homologous Superfamily
A, B, C, D, E
IPR001850Non-structural protein NS3, peptidase S7, flavivirusDomain
A, B, C, D, E
IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR002535Flavivirus polyprotein propeptideDomain
A, B, C, D, E
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
A, B, C, D, E
IPR007094RNA-directed RNA polymerase, catalytic domainDomain