Human ESCRT-I heterotetramer headpiece


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]SBP_bac_1e6vmeB1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
E [auth F]SBP_bac_1e6vmeF1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
F [auth G]SBP_bac_1e6vmeG1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
G [auth H]SBP_bac_1e6vmeH1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
H [auth I]SBP_bac_1e6vmeI1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
I [auth J]SBP_bac_1e6vmeJ1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
B [auth C]SBP_bac_1e6vmeC1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
J [auth K]SBP_bac_1e6vmeK1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
K [auth L]SBP_bac_1e6vmeL1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
L [auth M]SBP_bac_1e6vmeM1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
M [auth N]SBP_bac_1e6vmeN1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
N [auth O]SBP_bac_1e6vmeO1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
D [auth E]SBP_bac_1e6vmeE1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
T [auth U]SBP_bac_1e6vmeU1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
V [auth W]SBP_bac_1e6vmeW1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
X [auth Y]SBP_bac_1e6vmeY1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
W [auth X]SBP_bac_1e6vmeX1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)
U [auth V]SBP_bac_1e6vmeV1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: SBP_bac_1ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth B]6.10.140.820 Special Helix non-globular Helix Hairpins CATH (utative)
E [auth F]6.10.140.820 Special Helix non-globular Helix Hairpins CATH (utative)
F [auth G]6.10.140.820 Special Helix non-globular Helix Hairpins CATH (utative)
G [auth H]6.10.140.820 Special Helix non-globular Helix Hairpins CATH (utative)
H [auth I]6.10.140.820 Special Helix non-globular Helix Hairpins CATH (utative)
I [auth J]6.10.140.820 Special Helix non-globular Helix Hairpins CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF09454Vps23 core domain (Vps23_core)Vps23 core domainESCRT complexes form the main machinery driving protein sorting from endosomes to lysosomes. The core domain of the Vps23 subunit of the heterotrimeric ESCRT-I complex is a helical hairpin sandwiched in a fan-like formation between two other helical ...ESCRT complexes form the main machinery driving protein sorting from endosomes to lysosomes. The core domain of the Vps23 subunit of the heterotrimeric ESCRT-I complex is a helical hairpin sandwiched in a fan-like formation between two other helical hairpins from Vps28 (Pfam:PF03997) and Vps37. Vps23 gives ESCRT-I complex its stability [1].
Domain
PF03997VPS28 protein (VPS28)VPS28 protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Tumor susceptibility gene 101 protein
Vacuolar protein sorting-associated protein 37B
Vacuolar protein sorting-associated protein 28 homolog
Multivesicular body subunit 12A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR052070ESCRT-I complex UEV domain-containing proteinFamily
IPR016135Ubiquitin-conjugating enzyme/RWD-likeHomologous Superfamily
IPR037202ESCRT assembly domainHomologous Superfamily
IPR017916Steadiness box (SB) domainDomain
IPR008883Ubiquitin E2 variant, N-terminalDomain
IPR009851Modifier of rudimentary, ModrDomain
IPR029012Helix hairpin bin domain superfamilyHomologous Superfamily
IPR037202ESCRT assembly domainHomologous Superfamily
IPR007143Vacuolar protein sorting-associated Vps28Family
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminalDomain
IPR038358VPS28, N-terminal domain superfamilyHomologous Superfamily
IPR037202ESCRT assembly domainHomologous Superfamily
IPR037206VPS28, C-terminal domain superfamilyHomologous Superfamily
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminalDomain
IPR023340UMA domainDomain
IPR018798MVB12A/BUnknown
IPR023341MABP domainDomain
IPR040335Multivesicular body subunit 12AFamily