6VKJ
Crystal structure of the G domain of human guanylate-binding protein 2 (hGBP2) in complex with GDP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6vkja2 | All alpha proteins | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d6vkja1 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | G proteins | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02263 | Guanylate-binding protein, N-terminal domain (GBP) | Guanylate-binding protein, N-terminal domain | Transcription of the anti-viral guanylate-binding protein (GBP) is induced by interferon-gamma during macrophage induction. This family contains GBP1 and GPB2, both GTPases capable of binding GTP, GDP and GMP. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036543 | Guanylate-binding protein, C-terminal domain superfamily | Homologous Superfamily | |
IPR015894 | Guanylate-binding protein, N-terminal | Domain | |
IPR003191 | Guanylate-binding protein/Atlastin, C-terminal | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR030386 | GB1/RHD3-type guanine nucleotide-binding (G) domain | Domain | |
IPR037684 | Guanylate-binding protein, C-terminal | Domain |