Annotations: 6VK9

Cryo-EM structure of PilA-N/C from Geobacter sulfurreducens

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
P [auth 4]	ATP-synt_C	e6vk941	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
O [auth 2]	ATP-synt_C	e6vk921	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
N [auth 0]	ATP-synt_C	e6vk901	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
M [auth Y]	ATP-synt_C	e6vk9Y1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
L [auth W]	ATP-synt_C	e6vk9W1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
K [auth E]	ATP-synt_C	e6vk9E1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
J [auth C]	ATP-synt_C	e6vk9C1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
I [auth M]	ATP-synt_C	e6vk9M1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
H [auth K]	ATP-synt_C	e6vk9K1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
G [auth I]	ATP-synt_C	e6vk9I1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
F [auth G]	ATP-synt_C	e6vk9G1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
E [auth U]	ATP-synt_C	e6vk9U1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
D [auth S]	ATP-synt_C	e6vk9S1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
C [auth Q]	ATP-synt_C	e6vk9Q1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
B [auth O]	ATP-synt_C	e6vk9O1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)
A	ATP-synt_C	e6vk9A1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ATP-synt_C	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth O], C [auth Q], D [auth S], E [auth U], A, B [auth O], C [auth Q], D [auth S], E [auth U], F [auth G], G [auth I], H [auth K], I [auth M], J [auth C], K [auth E], L [auth W], M [auth Y], N [auth 0], O [auth 2], P [auth 4]	PF07963	Prokaryotic N-terminal methylation motif (N_methyl)	Prokaryotic N-terminal methylation motif	-	Motif

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth F], BA [auth X], CA [auth Z], DA [auth 1], EA [auth 3], AA [auth F], BA [auth X], CA [auth Z], DA [auth 1], EA [auth 3], FA [auth 5], Q [auth D], R [auth B], S [auth P], T [auth R], U [auth T], V, W [auth H], X [auth J], Y [auth L], Z [auth N]	Geopilin domain 2 protein	-	-	-
A, B [auth O], C [auth Q], D [auth S], E [auth U], A, B [auth O], C [auth Q], D [auth S], E [auth U], F [auth G], G [auth I], H [auth K], I [auth M], J [auth C], K [auth E], L [auth W], M [auth Y], N [auth 0], O [auth 2], P [auth 4]	Geopilin domain 1 protein	-	protein transport across the cell outer membrane establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport protein transport across the cell outer membrane establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization cellular process intracellular protein localization cellular component biogenesis cellular component organization cellular component assembly cell projection organization pilus assembly cellular component organization or biogenesis pilus organization cell projection assembly	cellular anatomical structure membrane protein-containing complex type II protein secretion system complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth O], C [auth Q], D [auth S], E [auth U], A, B [auth O], C [auth Q], D [auth S], E [auth U], F [auth G], G [auth I], H [auth K], I [auth M], J [auth C], K [auth E], L [auth W], M [auth Y], N [auth 0], O [auth 2], P [auth 4]	IPR000983	General secretion pathway protein G-type pilin	Family
A, B [auth O], C [auth Q], D [auth S], E [auth U], A, B [auth O], C [auth Q], D [auth S], E [auth U], F [auth G], G [auth I], H [auth K], I [auth M], J [auth C], K [auth E], L [auth W], M [auth Y], N [auth 0], O [auth 2], P [auth 4]	IPR012902	Prokaryotic N-terminal methylation site	PTM
A, B [auth O], C [auth Q], D [auth S], E [auth U], A, B [auth O], C [auth Q], D [auth S], E [auth U], F [auth G], G [auth I], H [auth K], I [auth M], J [auth C], K [auth E], L [auth W], M [auth Y], N [auth 0], O [auth 2], P [auth 4]	IPR045584	Pilin-like	Homologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, AA [auth F], B [auth O], BA [auth X], C [auth Q] A, AA [auth F], B [auth O], BA [auth X], C [auth Q], CA [auth Z], D [auth S], DA [auth 1], E [auth U], EA [auth 3], F [auth G], FA [auth 5], G [auth I], H [auth K], I [auth M], J [auth C], K [auth E], L [auth W], M [auth Y], N [auth 0], O [auth 2], P [auth 4], Q [auth D], R [auth B], S [auth P], T [auth R], U [auth T], V, W [auth H], X [auth J], Y [auth L], Z [auth N]	OPM	Transmembrane	Bitopic proteins	Type IV pilin	Bacterial pilin

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.