6VH6
Crystal structure of Epstein-Barr Virus Nuclear Antigen-1, EBNA1, bound to fragment
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6vh6a1 | Alpha and beta proteins (a+b) | Ferredoxin-like | Viral DNA-binding domain | Viral DNA-binding domain | Epstein barr virus nuclear antigen-1 (ebna1) | HHV-4 (Human herpesvirus 4 strain B95-8 ) [TaxId: 10377 ], | SCOPe (2.08) |
A | d6vh6a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | HHV-4 (Human herpesvirus 4 strain B95-8 ) [TaxId: 10377 ], | SCOPe (2.08) |
B | d6vh6b_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Viral DNA-binding domain | Viral DNA-binding domain | Epstein barr virus nuclear antigen-1 (ebna1) | HHV-4 (Human herpesvirus 4 strain B95-8 ) [TaxId: 10377 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02905 | e6vh6A1 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PF02905 | ECOD (1.6) |
B | PF02905 | e6vh6B1 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PF02905 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.390 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Epstein Barr virus nuclear antigen-1, DNA-binding domain | CATH (utative) |
B | 3.30.70.390 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Epstein Barr virus nuclear antigen-1, DNA-binding domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02905 | Epstein Barr virus nuclear antigen-1, DNA-binding domain (EBV-NA1) | Epstein Barr virus nuclear antigen-1, DNA-binding domain | This domain has a ferredoxin-like fold. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004186 | Epstein Barr virus nuclear antigen-1, DNA-binding | Domain | |
IPR035975 | E2/EBNA1, C-terminal | Homologous Superfamily | |
IPR037007 | Epstein Barr virus nuclear antigen-1, DNA-binding domain superfamily | Homologous Superfamily |