6VGD
Crystal structure of the DNA binding domain (DBD) of human FLI1 and the complex of the DBD of human Runx2 with core binding factor beta (Cbfb), in complex with 16mer DNA CAGAGGATGTGGCTTC
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8003108 | 3000034 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | p53-like transcription factors | 8102164 | 3000758 | SCOP2B (2022-06-29) |
E [auth G] | SCOP2B Superfamily | Core binding factor beta, CBF | 8042548 | 3001169 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ets | e6vgdA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: Ets | ECOD (1.6) |
D | Runt | e6vgdD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: Runt | ECOD (1.6) |
E [auth G] | CBF_beta | e6vgdG1 | A: beta barrels | X: CBF-like | H: Core binding factor beta, CBF (From Topology) | T: Core binding factor beta, CBF | F: CBF_beta | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00178 | Ets-domain (Ets) | Ets-domain | - | Domain | |
PF00853 | Runt domain (Runt) | Runt domain | - | Domain | |