6VAC
Mouse retromer (VPS26/VPS35/VPS29) heterotrimer
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Arrestin/Vps26-like | 8051910 | 3002071 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Arrestin/Vps26-like | 8051911 | 3002071 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Metallo-dependent phosphatases | 8035118 | 3001067 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03635 | e6vacA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF03635 | ECOD (1.6) |
B | PF03643 | e6vacB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF03643 | ECOD (1.6) |
C | PF12850 | e6vacC1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: PF12850 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03635 | Vacuolar protein sorting-associated protein 35 (Vps35) | Vacuolar protein sorting-associated protein 35 | - | Repeat | |
PF03643 | Vacuolar protein sorting-associated protein 26 (Vps26) | Vacuolar protein sorting-associated protein 26 | - | Family | |
PF12850 | Calcineurin-like phosphoesterase superfamily domain (Metallophos_2) | Calcineurin-like phosphoesterase superfamily domain | Members of this family are part of the Calcineurin-like phosphoesterase superfamily. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR005378 | Vacuolar protein sorting-associated protein 35 | Family | |
IPR042491 | Vacuolar protein sorting-associated protein 35, C-terminal | Homologous Superfamily | |
IPR028934 | Vacuolar protein sorting protein 26 related | Family | |
IPR014752 | Arrestin-like, C-terminal | Homologous Superfamily | |
IPR000979 | Phosphodiesterase MJ0936/Vps29 | Family | |
IPR024654 | Calcineurin-like phosphoesterase domain, lpxH-type | Domain | |
IPR029052 | Metallo-dependent phosphatase-like | Homologous Superfamily | |
IPR028661 | Vacuolar protein sorting-associated protein 29 | Family |