Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth E]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
B [auth E]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
D [auth F]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
D [auth F]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
G [auth D]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
G [auth D]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth E]TrkA_Ce6uwnE2 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
B [auth E]TrkA_Ne6uwnE1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
C [auth B]TrkA_Ce6uwnB2 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
C [auth B]TrkA_Ne6uwnB1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
D [auth F]TrkA_Ce6uwnF2 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
D [auth F]TrkA_Ne6uwnF1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
ATrkA_Ce6uwnA2 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
ATrkA_Ne6uwnA1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
E [auth C]TrkA_Ce6uwnC1 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
E [auth C]TrkA_Ne6uwnC2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
F [auth G]TrkA_Ce6uwnG2 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
F [auth G]TrkA_Ne6uwnG1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
G [auth D]TrkA_Ce6uwnD2 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
G [auth D]TrkA_Ne6uwnD1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
HTrkA_Ce6uwnH1 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
HTrkA_Ne6uwnH2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth E]3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (utative)
B [auth E]1.20.5.870 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Voltage-gated potassium channelCATH (utative)
B [auth E]3.30.70.1450 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Regulator of K+ conductance, C-terminal domainCATH (utative)
C [auth B]3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (utative)
C [auth B]1.20.5.870 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Voltage-gated potassium channelCATH (utative)
C [auth B]3.30.70.1450 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Regulator of K+ conductance, C-terminal domainCATH (utative)
D [auth F]3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (utative)
D [auth F]1.20.5.870 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Voltage-gated potassium channelCATH (utative)
D [auth F]3.30.70.1450 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Regulator of K+ conductance, C-terminal domainCATH (utative)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (utative)
A1.20.5.870 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Voltage-gated potassium channelCATH (utative)
A3.30.70.1450 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Regulator of K+ conductance, C-terminal domainCATH (utative)
E [auth C]3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (utative)
E [auth C]1.20.5.870 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Voltage-gated potassium channelCATH (utative)
E [auth C]3.30.70.1450 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Regulator of K+ conductance, C-terminal domainCATH (utative)
F [auth G]3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (utative)
F [auth G]1.20.5.870 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Voltage-gated potassium channelCATH (utative)
F [auth G]3.30.70.1450 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Regulator of K+ conductance, C-terminal domainCATH (utative)
G [auth D]3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (utative)
G [auth D]1.20.5.870 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Voltage-gated potassium channelCATH (utative)
G [auth D]3.30.70.1450 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Regulator of K+ conductance, C-terminal domainCATH (utative)
H3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (utative)
H1.20.5.870 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Voltage-gated potassium channelCATH (utative)
H3.30.70.1450 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Regulator of K+ conductance, C-terminal domainCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02080TrkA-C domain (TrkA_C)TrkA-C domainThis domain is often found next to the Pfam:PF02254 domain. The exact function of this domain is unknown. It has been suggested that it may bind an unidentified ligand [1]. The domain is predicted to adopt an all beta structure [1].Domain
PF02254TrkA-N domain (TrkA_N)TrkA-N domainThis domain is found in a wide variety of proteins. These protein include potassium channels Swiss:P31069, phosphoesterases Swiss:Q59027, and various other transporters. This domain binds to NAD.Domain