6UWI

Crystal structure of the Clostridium difficile translocase CDTb

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth m], B [auth G], BA [auth n], C [auth F], A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	PF17475	Clostridial binary toxin B/anthrax toxin PA domain 2 (Binary_toxB_2)	Clostridial binary toxin B/anthrax toxin PA domain 2	This domain forms the middle beta sandwish domain in anthrax toxin.	Domain
A, AA [auth m], B [auth G], BA [auth n], C [auth F], A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	PF03495	Clostridial binary toxin B/anthrax toxin PA Ca-binding domain (Binary_toxB)	Clostridial binary toxin B/anthrax toxin PA Ca-binding domain	This domain is a calcium binding domain in the anthrax toxin protective antigen.	Domain
A, AA [auth m], B [auth G], BA [auth n], C [auth F], A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	PF17476	Clostridial binary toxin B/anthrax toxin PA domain 3 (Binary_toxB_3)	Clostridial binary toxin B/anthrax toxin PA domain 3	This entry represents the beta-grasp domain in anthrax protective antigen.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth m], B [auth G], BA [auth n], C [auth F], A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	ADP-ribosyltransferase binding component	cation binding ion binding binding metal ion binding small molecule binding transferase activity catalytic activity	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization cellular process cellular component organization or biogenesis	extracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth m], B [auth G], BA [auth n], C [auth F], A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	IPR035331	Clostridial binary toxin B/anthrax toxin PA, domain 3	Domain
A, AA [auth m], B [auth G], BA [auth n], C [auth F], A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	IPR011658	PA14 domain	Domain
A, AA [auth m], B [auth G], BA [auth n], C [auth F], A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	IPR027439	Protective antigen, heptamerisation domain	Domain
A, AA [auth m], B [auth G], BA [auth n], C [auth F], A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	IPR035088	Protective antigen, Ca-binding domain	Domain
A, AA [auth m], B [auth G], BA [auth n], C [auth F], A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	IPR037149	Protective antigen, heptamerisation domain superfamily	Homologous Superfamily
A, AA [auth m], B [auth G], BA [auth n], C [auth F], A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	IPR003896	Bacterial exotoxin B	Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, AA [auth m], B [auth G], BA [auth n], C [auth F] A, AA [auth m], B [auth G], BA [auth n], C [auth F], D [auth E], E [auth D], F [auth C], G [auth B], H, I, J, K, L, M, N, O [auth a], P [auth g], Q [auth f], R [auth e], S [auth d], T [auth c], U [auth b], V [auth h], W [auth i], X [auth j], Y [auth k], Z [auth l]	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Adventitious Membrane Proteins: Beta-sheet Pore-forming Toxins/Attack Complexes	binary toxin translocase CDTb in asymmetric tetradecamer conformation

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.